BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16875 (UTR included)
(1963 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1695_C1 105 3e-22
BF14_1645_C1 101 4e-21
BF14_2430_C1 100 2e-20
BF01025B1E11 84 1e-15
BF14_3240_C1 80 2e-14
>BF14_1695_C1
Length = 1407
Score = 105 bits (53), Expect = 3e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 320 tcctccattgtacacgacgctggcagaatatactgtgcacgtctttgcacgaatgaaggc 379
|||| |||| |||| ||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 1173 tccttcattctacatgacactggcagaatatactgtgcacgtctttgcacggatgaatgc 1232
Query: 380 catattataaaaaaaaa 396
|||||||||||||||||
Sbjct: 1233 catattataaaaaaaaa 1249
>BF14_1645_C1
Length = 793
Score = 101 bits (51), Expect = 4e-21
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 320 tcctccattgtacacgacgctggcagaatatactgtgcacgtctttgcacgaatgaaggc 379
||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||
Sbjct: 116 tcctccattctacacgacactggcagaatatactgtgcacgtcttggcacgggtgaaggc 175
Query: 380 catattataaaaaaa 394
|||| ||||||||||
Sbjct: 176 cataatataaaaaaa 190
>BF14_2430_C1
Length = 830
Score = 99.6 bits (50), Expect = 2e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 320 tcctccattgtacacgacgctggcagaatatactgtgcacgtctttgcacgaatgaaggc 379
||||||||| |||||||| ||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 166 tcctccattctacacgacactggcagaatatactgtgcacatctttgcacgtatgaaggc 225
Query: 380 catatt 385
||||||
Sbjct: 226 catatt 231
>BF01025B1E11
Length = 786
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 320 tcctccattgtacacgacgctggcagaatatactgtgcacgtctttgcacgaatgaaggc 379
||||||||| ||||||| ||||||||||||| |||||||||| ||||||| ||||||||
Sbjct: 202 tcctccattctacacgatactggcagaatatattgtgcacgtccttgcacggatgaaggc 261
Query: 380 catatt 385
||||||
Sbjct: 262 catatt 267
>BF14_3240_C1
Length = 2110
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 323 tccattgtacacgacgctggcagaatatactgtgcacgtctttgcacgaatgaaggccat 382
|||||| |||||| | ||||| ||||||||||||||| ||| |||||| |||||||||||
Sbjct: 1611 tccattctacacggcactggcggaatatactgtgcacttctctgcacggatgaaggccat 1670
Query: 383 attataaaaaaaaaaa 398
|||||| ||||||||
Sbjct: 1671 attatattaaaaaaaa 1686
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 503,843
Number of extensions: 49689
Number of successful extensions: 49689
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 49689
Number of HSP's successfully gapped: 5
Length of query: 1963
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1946
Effective length of database: 8,119,229
Effective search space: 15800019634
Effective search space used: 15800019634
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)