BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16894 (UTR included)
(3178 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010A2C12 1291 0.0
>BF01010A2C12
Length = 667
Score = 1291 bits (651), Expect = 0.0
Identities = 663/667 (99%)
Strand = Plus / Plus
Query: 2111 ccaggctcagcggtacgaggctgcgtccaccatctacggccccaacacgctgcacatata 2170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaggctcagcggtacgaggctgcgtccaccatctacggccccaacacgctgcacatata 60
Query: 2171 cctccacaagtacaagcaactcactgaggccctgatgaagggctccgctgtccccccggg 2230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctccacaagtacaagcaactcactgaggccctgatgaagggctccgctgtccccccggg 120
Query: 2231 cccgtctccgcccgacctgagccaacagctcatcacgctggtgcctcccgtgctgtggga 2290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccgtctccgcccgacctgagccaacagctcatcacgctggtgcctcccgtgctgtggga 180
Query: 2291 ttccgccccctacaagcacgagttcggggactgcctgcagcagccgcagcgacactacag 2350
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 ctccgccccctacaagcacgagttcggggactgcctgcagcagccgcagcgatactacag 240
Query: 2351 ctacggagacaccgtcaccgccacattcgtgtcgggtcaccccaggaacagccctcgtca 2410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctacggagacaccgtcaccgccacattcgtgtcgggtcaccccaggaacagccctcgtca 300
Query: 2411 cggtcgctggttcctgtccgtggagcgcctggtcccgttctccgaggacgcctgggaggt 2470
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 301 cggtcgctggttcctgtccgtggagcgcctggtcccgggctccgaggacgcctgggaggt 360
Query: 2471 ggtcgccacagacgcggactgggagaccaaatatatctggaagcgtaactctaagatcct 2530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtcgccacagacgcggactgggagaccaaatatatctggaagcgtaactctaagatcct 420
Query: 2531 gggcacgagcgaggcggtggtggagtgggaggtggcggagggcactcccgcggggacgta 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gggcacgagcgaggcggtggtggagtgggaggtggcggagggcactcccgcggggacgta 480
Query: 2591 ccggcttcaccactacgggaactacaagtacatcctggggggagtctacccctaccacgg 2650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccggcttcaccactacgggaactacaagtacatcctggggggagtctacccctaccacgg 540
Query: 2651 gttcactgacgccttccaagtctcttaaatataacaaactagtcgggacgaaactcggga 2710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gttcactgacgccttccaagtctcttaaatataacaaactagtcgggacgaaactcggga 600
Query: 2711 ctgtaggaactcctccagactcggagactaccccggctcccacaacatgcctggacccgg 2770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctgtaggaactcctccagactcggagactaccccggctcccacaacatgcctggacccgg 660
Query: 2771 cgctatg 2777
|||||||
Sbjct: 661 cgctatg 667
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 263,023
Number of extensions: 5328
Number of successful extensions: 5328
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5328
Number of HSP's successfully gapped: 1
Length of query: 3178
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3160
Effective length of database: 8,109,745
Effective search space: 25626794200
Effective search space used: 25626794200
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)