BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16902 (UTR included)
(1946 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3357_C1 1576 0.0
>BF14_3357_C1
Length = 1345
Score = 1576 bits (795), Expect = 0.0
Identities = 828/839 (98%)
Strand = Plus / Plus
Query: 136 ctgtgtacagactacaaacctcgcagtaaaccgttagtagatgagagcactttgtctggt 195
|||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 220 ctgtgtacagactacaaaccacgcagtaaaccgttagtagatgagagcactttatccggt 279
Query: 196 aacctgcgagaaccggacagagctgtacccgatgatttcatacacatgttcctgagcaat 255
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aacctgcgagaacccgacagagctgtacccgatgatttcatacacatgttcctgagcaat 339
Query: 256 tctgagcgtctcatagacttcctcgagcatatggtgaccaaggacactcaatgctcgagt 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tctgagcgtctcatagacttcctcgagcatatggtgaccaaggacactcaatgctcgagt 399
Query: 316 ctcgtctacaatgctctaattgagcattatatacacgtctgggccaaatcgtctgaagcg 375
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 400 ctcgtctacaatgctctaattgagcattatatacacgtctgggccaagtcgtctgaagcg 459
Query: 376 gacaagaggatttacgagcagaaagtactcgatatcatcaaagaccccgaagccaaatac 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gacaagaggatttacgagcagaaagtactcgatatcatcaaagaccccgaagccaaatac 519
Query: 436 gacaaagatcaaactctcattatttgccaaatgctgggattcaagagtggcatcctccaa 495
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gacaaagatcaaacgctcattatttgccaaatgctgggattcaagagtggcatcctccag 579
Query: 496 ctatacgaggagaaaagactatggcgtgctcagatatctctccacctccgtacaccgggc 555
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ctatacgaagagaaaagactatggcgtgctcagatatctctccacctccgtacaccgggc 639
Query: 556 ggcacagagcgcgcgctcggagtgtgtcgtcgtcgcggagggagtgcgccgcgtttgtgg 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ggcacagagcgcgcgctcggagtgtgtcgtcgtcgcggagggagtgcgccgcgtttgtgg 699
Query: 616 ctggacgtactatgggcacctccaccaccagattaccttccagaactgctcagagtcgtg 675
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 700 ctggacgtactatgggcacctcccccaccagattaccttccagaactgctcagagtcgtg 759
Query: 676 gctgccgaaaaactgttatcacccatcctggtcatcgattgcctggcgagtacaccgacc 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 gctgccgaaaaactgttatcacccatcctggtcatcgattgcctggcgagtacaccgacc 819
Query: 736 tacacactcggagatgtccgcaagtacctgacggacgttttgaagtctgaggacgaagtg 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 tacacactcggagatgtccgcaagtacctgacggacgttttgaagtctgaggacgaagtg 879
Query: 796 atcactagagaacaggaactggcagcgaaatacaagaaggagatagaagagatgaagact 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 atcactagagaacaggaactggcagcgaaatacaagaaggagatagaagagatgaagact 939
Query: 856 cagatacacaacatacagaacgaacctatcacgttccagaggagcctgtgcgcggcctgc 915
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 940 cagatacacaacatacagaacgaacctatcacgttccagaggagcctgtgtgcggcctgc 999
Query: 916 agcaggccgctcgagttgcctaccgtacacttcatgtgtcagcactccttccacaagga 974
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 agcaggccgctcgagttgcccaccgtacacttcatgtgtcagcactccttccacaagga 1058
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 168,239
Number of extensions: 2796
Number of successful extensions: 2796
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2796
Number of HSP's successfully gapped: 1
Length of query: 1946
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1929
Effective length of database: 8,119,229
Effective search space: 15661992741
Effective search space used: 15661992741
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)