BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16908 (UTR included)
(4009 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3467_C1 1080 0.0
BF01019B2E06 918 0.0
>BF14_3467_C1
Length = 1530
Score = 1080 bits (545), Expect = 0.0
Identities = 558/561 (99%), Gaps = 1/561 (0%)
Strand = Plus / Plus
Query: 2095 caggtgaggctgctctcatgccgccgcctctcgcccccctcgcgcctctcccgcccgctc 2154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 caggtgaggctgctctcatgccgccgcctctcgcccccctcgcgcctctcccgcccgctc 1030
Query: 2155 gccggacctctctgctgcacgaccctcactctccgctgggactcaagagcgaggtggacg 2214
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 1031 gccggacctctctgctgcacgaccctcactctccgctgggactcaagagcaag-tggacg 1089
Query: 2215 agtccagccaacactcgctgctggagggcgagcgctcggagcccgacgcgccgctcgccg 2274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 agtccagccaacactcgctgctggagggcgagcgctcggagcccgacgcgccgctcgccg 1149
Query: 2275 atgacatcatggacctgcggctcaagtcggagaccatcacctgcgactcgcagacacagg 2334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 atgacatcatggacctgcggctcaagtcggagaccatcacctgcgactcgcagacacagg 1209
Query: 2335 tgggtttcgtgagcggttacgactctatcaagctgtctccgaacactacgtcgcgggacg 2394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1210 tgggtttcgtgagcggttacgactctatcaagctgtctccgaacactacgtcgcgggacg 1269
Query: 2395 agtccccgtccgtgatcgcgtctttcacacagcagctgcaggccatacagaaccaggtgc 2454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1270 agtccccgtccgtgatcgcgtctttcacacagcagctgcaggccatacagaaccaggtgc 1329
Query: 2455 agacggacaagatggtcgagtccgtgaccgccgctatcttcaactctgacaacgccggcc 2514
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1330 agacggacaagatggtcgagtccgtgaccgccgccatcttcaactctgacaacgccggcc 1389
Query: 2515 agatgtacgagcagccgctgcttcccatcaacaccatggacaccatgcagcggatcatgt 2574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1390 agatgtacgagcagccgctgcttcccatcaacaccatggacaccatgcagcggatcatgt 1449
Query: 2575 ctgccaagaccgccatggacccgctcgaccgagacatgaaagtactgaactcagacctga 2634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1450 ctgccaagaccgccatggacccgctcgaccgagacatgaaagtactgaactcagacctga 1509
Query: 2635 tgatgaccggcgaccccatgc 2655
|||||||||||||||||||||
Sbjct: 1510 tgatgaccggcgaccccatgc 1530
>BF01019B2E06
Length = 568
Score = 918 bits (463), Expect = 0.0
Identities = 469/471 (99%)
Strand = Plus / Plus
Query: 1629 agatgccgcatggtcttccgcaccgagatactggactccaacggacaaacagagaccctg 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatgccgcatggtcttccgcaccgagatactggactccaacggacaaacagagaccctg 60
Query: 1689 caagtctgctccacacagatcatatgcacccagcctcccggagtaccggaagtgtgcagg 1748
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagtctgctctacacagatcatatgcacccagcctcccggagtaccggaagtgtgcagg 120
Query: 1749 aagtcgctggtgtcgtgtccggtgacgggcggcttggagttgtacctgctggggaagaac 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagtcgctggtgtcgtgtccggtgacgggcggcttggagttgtacctgctggggaagaac 180
Query: 1809 ttcctgaaggagaccagagtggtgttccgcgtcaaacaagacggagtcacctgggaggag 1868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcctgaaggagaccagagtggtgttccgcgtcaaacaagacggagtcacctgggaggag 240
Query: 1869 gaggtcgttccggacaaggagttcttgcaacagacccacctggtgtgctgcgtgccggcg 1928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 241 gaggtcgttccggacaaggagttcttgcaacagacccacctggtgtgctgcgtgccgccg 300
Query: 1929 tactcgcgccccgacatccaggaggcggtgtgcgtccagttgttcgtgcgctcgggcggc 1988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tactcgcgccccgacatccaggaggcggtgtgcgtccagttgttcgtgcgctcgggcggc 360
Query: 1989 aagtcctccgagccgcacgccttctactacacgccggccggggcgcgcgcgatgcactgc 2048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagtcctccgagccgcacgccttctactacacgccggccggggcgcgcgcgatgcactgc 420
Query: 2049 acccagcaccccgcgcacacccccctcaccccccacacccctcacacaggt 2099
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acccagcaccccgcgcacacccccctcaccccccacacccctcacacaggt 471
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 281,179
Number of extensions: 4499
Number of successful extensions: 4499
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4498
Number of HSP's successfully gapped: 2
Length of query: 4009
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3991
Effective length of database: 8,109,745
Effective search space: 32365992295
Effective search space used: 32365992295
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)