BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16910 (UTR included)
(2240 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2313_C1 591 e-168
>BF14_2313_C1
Length = 1003
Score = 591 bits (298), Expect = e-168
Identities = 311/314 (99%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 1928 ttttataacatttaattaattactcaaaacaaataacataaagacgatcatcgtaatcgc 1987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 ttttataacatttaattaattactcaaaacaaataacataaagacgatcatcgtaatcgc 101
Query: 1988 tcggcaagttgcattgattgaggccgactagagatctatgctacggcacacggacgacac 2047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tcggcaagttgcattgattgaggccgactagagatctatgctacggcacacggacgacac 161
Query: 2048 gcggcgcggtcgcacgccggcgctgcggaggctcgcacggagcggacaggcgccggcgcg 2107
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 162 gcggcgcggtcgcacgccggcgctgcggaggctcgcccggagcggacaggcgccggcgcg 221
Query: 2108 ataacgatagagtaatcggaagactgaggacatactgtgtgtaactcgatgaaacgtggc 2167
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ataacaatagagtaatcggaagactgaggacatactgtgtgtaactcgatgaaacgtggc 281
Query: 2168 gccttgcgagact-cgggtcgatataaacactaacgtaatgttttacatttagttcaaaa 2226
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gccttgcgagactccgggtcgatataaacactaacgtaatgttttacatttagttcaaaa 341
Query: 2227 agtcacaaactcgt 2240
||||||||||||||
Sbjct: 342 agtcacaaactcgt 355
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,289
Number of extensions: 9160
Number of successful extensions: 9160
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9159
Number of HSP's successfully gapped: 1
Length of query: 2240
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2223
Effective length of database: 8,119,229
Effective search space: 18049046067
Effective search space used: 18049046067
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)