BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16926 (UTR included)
(1123 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2272_C1 1189 0.0
>BF14_2272_C1
Length = 964
Score = 1189 bits (600), Expect = 0.0
Identities = 622/629 (98%), Gaps = 4/629 (0%)
Strand = Plus / Plus
Query: 490 acagtattccgatggattggttcgtcaatgaaatgataaatagccccgatttcgtccgat 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 acagtattccgatggattggttcgtcaatgaaatgataaatagccccgatttcgtccgat 354
Query: 550 ctgtcgtactcaaattcatagaccttaatcaggacggcatgctctcagcggaggaacttt 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctgtcgtactcaaattcatagaccttaatcaggacggcatgctctcagcggaggaacttt 414
Query: 610 taagaaaatattgaatgatttctgttaaatctcgtgattctctttaacccattgattagt 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 taagaaaatattgaatgatttctgttaaatctcgtgattctctttaacccattgattagt 474
Query: 670 tttatataaatcttttactgagttataatcattttgtaacttacggcactgtgatatatt 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tttatataaatcttttactgagttataatcattttgtaacttacggcactgtgatatatt 534
Query: 730 aaatattgtttcatgaaaatataaacgtctattatttatgacttgacagatattaatact 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aaatattgtttcatgaaaatataaacgtctattatttatgacttgacagatattaatact 594
Query: 790 ttgtaaatacttttaaattgtctataattttcggtgcatttagattgccatgattctgta 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttgtaaatacttttaaattgtctataattttcggtgcatttagattgccatgattctgta 654
Query: 850 acatgtactgtgttaatataattcgtatttaaaaattcgtttattttatttattcgactt 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 acatgtactgtgttaatataattcgtatttaaaaattcgtttattttatttattcgactt 714
Query: 910 gtaatcactaacattattatcattttaaacaattaccactgtactatttggttccgtacc 969
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gtaatc----acattattatcattttaaacaattaccactgtactatttggttccgtacc 770
Query: 970 acaatgttagccagctacgttcatttcctaaagaatttttgcagaatccttaacgtacaa 1029
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 acaatgttagccagcttcgttcatttcctaaagaatttttgcagaatccttaacgtacaa 830
Query: 1030 taacagctaagtctataggattattcttgtggtatctttaataaaggtgctttttattca 1089
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 831 taacagctaagtctataggattattcttgttctatctttaataaaggtgctttttattca 890
Query: 1090 cacaatattaatgccttcttcatttctaa 1118
|||||||||||||||||||||||||||||
Sbjct: 891 cacaatattaatgccttcttcatttctaa 919
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 199,165
Number of extensions: 4554
Number of successful extensions: 4554
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4553
Number of HSP's successfully gapped: 1
Length of query: 1123
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1106
Effective length of database: 8,119,229
Effective search space: 8979867274
Effective search space used: 8979867274
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)