BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16927 (UTR included)
(1330 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2303_C1 1639 0.0
BF01037A2C11 82 3e-15
>BF14_2303_C1
Length = 1040
Score = 1639 bits (827), Expect = 0.0
Identities = 887/908 (97%), Gaps = 13/908 (1%)
Strand = Plus / Plus
Query: 391 aggcgaagtcggatggcagtctagcgggcgcgggggcggaggacggggggtcattgaccg 450
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 110 aggcgaagtcggatggcagtctagcgggcgcgggggccgaggacgggggttcattgaccg 169
Query: 451 cagggggaaaggttcgatcaaggagtctcgaaccactcacaggactagcaatgtgggcgt 510
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 170 cagggggaaaggttcgatcaaggagtctcgaaccactcacaggactagcgatgtgggcgt 229
Query: 511 ccgagccacagattattgagctggtgaagggcgaacgaggtttgggcttctccatccttg 570
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 230 ccgagccacagattattgagctggtgaagggcgagcgaggtttgggcttctccatccttg 289
Query: 571 actaccaggatcccctgcgtccctcgcacaccctggtggtaatacggtccctggtgccgg 630
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 290 actaccaggatcccctgcgtccctcgcacaccctggtggtgatacggtccctggtgccgg 349
Query: 631 gcggcgtggcccagcaggacggcaggctcataccaggcgacaggctcctcttc------- 683
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gcggcgtggcccagcaggacggcaggctcataccaggcgacaggctcctcttcgtcaacg 409
Query: 684 -----aacttggagaacgctagtctagaacaagccgtcgctgctttaaagggcgcccccc 738
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aacagaacttggagaacgctagtctagaacaagccgtcgctgctttaaagggcgcccccc 469
Query: 739 gtggcgtggtccgtattggcgtggcgaagcctctaccactaaccgacggtcccccaccac 798
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 470 gtggcgtggtccgtattggcgtggcgaagcctctgccactaaccgacggtcccccaccac 529
Query: 799 taccggctacctccccaccaccacaccactagatgcactcataaatacactctcattaat 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 taccggctacctccccaccaccacaccactagatgcactcataaatacactctcattaat 589
Query: 859 acattttattatagaaaatcatttttggtcaatttcaataatgtaggagaactttattta 918
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 590 acattttattataaaaaatcatttttggtcaattccaataatgtaggagaactttattta 649
Query: 919 aaacaaaagccaccactacatcagatgtaacccacataacta-cacatgttctacaataa 977
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 650 aaacaaaagccaccactacatcagatgtaacccacataactatcacatgttctacaataa 709
Query: 978 tagttatataacgaagaaaatctgagatgtttgtgatttaaataatatttattcgggttt 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tagttatataacgaagaaaatctgagatgtttgtgatttaaataatatttattcgggttt 769
Query: 1038 cttttcgcactgcatttcttctttaatacaattcattacccaataatttcgtatcatcca 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 cttttcgcactgcatttcttctttaatacaattcattacccaataatttcgtatcatcca 829
Query: 1098 tagatttgtattaattgtacttaatatagattatagggaatatatttttacattttgaca 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 tagatttgtattaattgtacttaatatagattatagggaatatatttttacattttgaca 889
Query: 1158 acataattactgcttgtaggtaatagtaatattttgtttatcaaataaattggttatagt 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 acataattactgcttgtaggtaatagtaatattttgtttatcaaataaattggttatagt 949
Query: 1218 acttcatgagactgtatgtacattccttttcgattcatgtttatatatatatatatatat 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 950 acttcatgagactgtatgtacattccttttcgattcatgtttatatatatatatatatat 1009
Query: 1278 atatatat 1285
||||||||
Sbjct: 1010 atatatat 1017
>BF01037A2C11
Length = 756
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 214 atgcaagaacaagaccaagactgcaagaccaaaaccgattttgggcaacacta 266
|||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 327 atgcaagaacaagacccagactgcaagaccaagtccgattttgggcaacacta 275
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 213,478
Number of extensions: 13927
Number of successful extensions: 13927
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 13919
Number of HSP's successfully gapped: 3
Length of query: 1330
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1313
Effective length of database: 8,119,229
Effective search space: 10660547677
Effective search space used: 10660547677
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)