BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16930 (UTR included)
(4111 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3401_C1 1522 0.0
>BF14_3401_C1
Length = 785
Score = 1522 bits (768), Expect = 0.0
Identities = 780/784 (99%)
Strand = Plus / Plus
Query: 1412 tgcgtcggtagcacaacatataatgcatcgctgcgtgatgggtgtgttgcgacacaccac 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgcgtcggtagcacaacatataatgcatcgctgcgtgatgggtgtgttgcgacacaccac 61
Query: 1472 acgagtgttagtgacgcactcgccacgccatctagcgggggcggcgcgggctctgctctt 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 acgagtgttagtgacgcactcgccacgccatctagcgggggcggcgcgggctctgctctt 121
Query: 1532 acaggaaggacggatcgccgcactcggttcacccgaagccgttttgaacgaaatcgaaga 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 acaggaaggacggatcgccgcactcggttcacccgaagccgttttgaacgaaatcgaaga 181
Query: 1592 atattttcccagtgaagcggattcattaggcgaagaaccggctcagagccgagaagaaga 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atattttcccagtgaagcggattcattaggcgaagaaccggctcagagccgagaagaaga 241
Query: 1652 gaaaaaacacgacgaatctgataacatcagtagaaatagcttagacaatgacgaagctat 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaaaaaacacgacgaatctgataacatcagtagaaatagcttagacaatgacgaagctat 301
Query: 1712 gtcagaaggttcagtgaattggtgggtgatcggcctgtatctcagatcagtcggagcgtt 1771
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtcagaaggttcagtggattggtgggtgatcggcctgtatctcagatcagtcggagcgtt 361
Query: 1772 tctgacgacgtgcatcataatatcgctggtgttgatgcagctgtcacagaacttcacttt 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tctgacgacgtgcatcataatatcgctggtgttgatgcagctgtcacagaacttcacttt 421
Query: 1832 cgtctggctgacgttttgggtcaggaacaaaacgaagaattcgaccgccctcttcataga 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cgtctggctgacgttttgggtcaggaacaaaacgaagaattcgaccgccctcttcataga 481
Query: 1892 caatgtccacgagaacgccacagtactggatcacggtttcaatttcgctgacaatatcgt 1951
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 caatgtccacgagaacaccacagtactggatcacggtttcaatttcgctgacaatatcgt 541
Query: 1952 tcatacgattgtaaatacattggctgttattaatagagtcaatatgaccactgaacggtc 2011
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 542 tcatacgattgtaaatacattgactgttattaatagagtcaatatgaccactgaacggtc 601
Query: 2012 gccagatgtcgctgggactgtcctagaagtacccaagttaagacttccatcgtacactga 2071
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 accagatgtcgctgggactgtcctagaagtacccaagttaagacttccatcgtacactga 661
Query: 2072 taactattatctagaagtttatttcggcttagctggtctcaatttggtatttactataat 2131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 taactattatctagaagtttatttcggcttagctggtctcaatttggtatttactataat 721
Query: 2132 gagggccttcctgtttgcttatggtggtgttaaagcagcttcgaagatacacagaattct 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gagggccttcctgtttgcttatggtggtgttaaagcagcttcgaagatacacagaattct 781
Query: 2192 tctc 2195
||||
Sbjct: 782 tctc 785
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 394,959
Number of extensions: 8973
Number of successful extensions: 8973
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8973
Number of HSP's successfully gapped: 1
Length of query: 4111
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4093
Effective length of database: 8,109,745
Effective search space: 33193186285
Effective search space used: 33193186285
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)