BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16933 (UTR included)
(4750 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050B1D03 1340 0.0
>BF01050B1D03
Length = 772
Score = 1340 bits (676), Expect = 0.0
Identities = 688/692 (99%)
Strand = Plus / Plus
Query: 1968 gacgaaattacagatgaagaagtatcgaatctcctgatgcaacgttcccacgtgatttcc 2027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 gacgaaattacagatgaagaagtatcgaatctcctgatgcaacgttcccacgtgatttcc 140
Query: 2028 cactccgaggtcctgcgagctgtgtacgagcgcgtccacgacacctccagcaccataagg 2087
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cactccgatgtcctgcgagctgtgtacgagcgcgtccacgacacctccagcaccataagg 200
Query: 2088 acccgcgccctcgtcatactcacagactgcttgcactcggaactaccagcgatacggcag 2147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccgcgccctcgtcatactcacagactgcttgcactcggaactaccagcgatacggcag 260
Query: 2148 gctgtgcaggaactgagcggggagggcgaggtgtctcggctggcggcggtgggcgcgcgg 2207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgtgcaggaactgagcggggagggcgaggtgtctcggctggcggcggtgggcgcgcgg 320
Query: 2208 tgtgtgtgtgacgagcgagccatagtccgcaaggcggccgtcggtctaatacacagactg 2267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtgtgtgacgagcgagccatagtccgcaaggcggccgtcggtctaatacacagactg 380
Query: 2268 atagcgaactcgggcgacggacggacactcaccaaagaatatgcgatgttggtgggttta 2327
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 381 atagcgaactcgggcgacggacggacacccgccaaagaatatgcgatgttggtgggttta 440
Query: 2328 tgccgcgatgccagtatcgtggtgaggtcatccgctatagcagccctgggcgagatggtg 2387
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 tgccgcgatgccagtatcgtggtgaggtcatccgctatcgcagccctgggcgagatggtg 500
Query: 2388 ggtaaggctccgagcgaggcctcgctggacgccttcctcaccggtcccatgcaccagctg 2447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtaaggctccgagcgaggcctcgctggacgccttcctcaccggtcccatgcaccagctg 560
Query: 2448 tccgaccctgaaactaagatacaagagcaagtggtgacgctgatccaacagctgttgatg 2507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccgaccctgaaactaagatacaagagcaagtggtgacgctgatccaacagctgttgatg 620
Query: 2508 gcgcgcttcaagaagtatgacgcgagctcggacgaggacccgctgccctggctgttcctg 2567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcgcgcttcaagaagtatgacgcgagctcggacgaggacccgctgccctggctgttcctg 680
Query: 2568 ggcggcgtcaccagacacaacctccggagacaccttcaaaaggcttgcactctgttggtt 2627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggcggcgtcaccagacacaacctccggagacaccttcaaaaggcttgcactctgttggtt 740
Query: 2628 aaatcctcaaattatattaatcatcgtatagt 2659
||||||||||||||||||||||||||||||||
Sbjct: 741 aaatcctcaaattatattaatcatcgtatagt 772
Score = 513 bits (259), Expect = e-145
Identities = 268/271 (98%)
Strand = Plus / Plus
Query: 1699 aaaatgaaacgccagcgcaagccaatgacacggagactattggagaaaatactgaggaac 1758
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaatgaaatgccagcgcaagccaatgacacggagactattggagaaaatactgaggaac 60
Query: 1759 aattgcctacaaatgacgatgacgaaattacagatgaagaagtatcgaatctcctgatgc 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattgcctacaaatgacgatgacgaaattacagatgaagaagtatcgaatctcctgatgc 120
Query: 1819 aacgttcccacgtgatttcccactccgacgtcctgcgagctgtgtacgagcgcgtccacg 1878
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 aacgttcccacgtgatttcccactccgatgtcctgcgagctgtgtacgagcgcgtccacg 180
Query: 1879 acacctccagcaccataaggacccgcgcgctcgtcatactcacagactgcttgcactcgg 1938
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 181 acacctccagcaccataaggacccgcgccctcgtcatactcacagactgcttgcactcgg 240
Query: 1939 aactaccagcgatacggcaggctgtgcagga 1969
|||||||||||||||||||||||||||||||
Sbjct: 241 aactaccagcgatacggcaggctgtgcagga 271
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 520,777
Number of extensions: 15274
Number of successful extensions: 15274
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15274
Number of HSP's successfully gapped: 2
Length of query: 4750
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4732
Effective length of database: 8,109,745
Effective search space: 38375313340
Effective search space used: 38375313340
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)