BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16934 (UTR included)
(1996 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3081_C1 1867 0.0
>BF14_3081_C1
Length = 1120
Score = 1867 bits (942), Expect = 0.0
Identities = 970/978 (99%), Gaps = 1/978 (0%)
Strand = Plus / Plus
Query: 493 cagctactatgagcaagcgaaagaatccatctaccaataataatgtgaatgcagattttt 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 cagctactatgagcaagcgaaagaatccatctaccaataataatgtgaatgcagattttt 202
Query: 553 gcgactttttaatggaattagctgattatgaaaa-aaatgtcagtcgtaatattcataaa 611
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 203 gcgactttttaatggaattagctgattatgaaaaaaaatgtcagtcgtaatattcataaa 262
Query: 612 tacaatgcctatcgtaaagctgctagcgttttagctgcccatcataaacgtattgaatct 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tacaatgcctatcgtaaagctgctagcgttttagctgcccatcataaacgtattgaatct 322
Query: 672 gggcagcaagcaaagaagttaaatggtgtaggagaaaaaatatcaaaaaaaattgacgag 731
|| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggacaggaagcaaagaagttaaatggtgtaggagaaaaaatatcaaaaaaaattgacgag 382
Query: 732 ttcttacaaacgggaaaattgagaaaattagaaaatatacataatgacgaaaaggcgcaa 791
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 383 ttcttacaaacgggaaaattgagaaaattagaaaatatacataatgacgaaaaggcacaa 442
Query: 792 gctatcagtttactaacacgggtttcgggtatcggtcctgtgaaagctgctgatttaatt 851
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 443 gctattagtttactaacacgggtttcgggtatcggtcctgtaaaagctgctgatttaatt 502
Query: 852 gataagggtataaaaactttagaagatttgaacaaaaaccaagatttgttaaaccaccat 911
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 503 gataagggtataaaaactttagatgatttgaacaaaaaccaagatttgttaaaccaccat 562
Query: 912 caactgattggtctgaagtatttcgaaaatttcgaggagaagattcctcgtgaagaaatt 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 caactgattggtctgaagtatttcgaaaatttcgaggagaagattcctcgtgaagaaatt 622
Query: 972 caaaaaatagaggcaataataaaaaaaaatattttagatttagattgtgattatactatt 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 caaaaaatagaggcaataataaaaaaaaatattttagatttagattgtgattatactatt 682
Query: 1032 accatttgtggcagttacaggcgcggcgcatcacaaagtggcgacattgacgtgctagtt 1091
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 accatttgtggcagctacaggcgcggcgcatcacaaagtggcgacattgacgtgctagtt 742
Query: 1092 acacacccaacgatgaagttggataaggaaaaaatcggtgaaaagcttttgaaagaaata 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 acacacccaacgatgaagttggataaggaaaaaatcggtgaaaagcttttgaaagaaata 802
Query: 1152 aaagaggctttaggagaactcattgttgacgtgatatcaatgggtgcgacgaagtttatg 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aaagaggctttaggagaactcattgttgacgtgatatcaatgggtgcgacgaagtttatg 862
Query: 1212 ggcgtctgtcgtctgtcagacggacatttaaaccggcgtttggacattcggctcatacca 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 ggcgtctgtcgtctgtcagacggacatttaaaccggcgtttggacattcggctcatacca 922
Query: 1272 aatgaacagtaccactgcgccgtcctttacttcaccggaagtgacgttttcaataaaaat 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 aatgaacagtaccactgcgccgtcctttacttcaccggaagtgacgttttcaataaaaat 982
Query: 1332 atgagagcacatgctttggaaaaacgatttacactgaatgaatactccctgcgaccgatc 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 atgagagcacatgctttggaaaaacgatttacactgaatgaatactccctgcgaccgatc 1042
Query: 1392 ggtgtaaccggtgtccacggacagccggtgccgatcacatcagaagaagacattttcgac 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 ggtgtaaccggtgtccacggacagccggtgccgatcacatcagaagaagacattttcgac 1102
Query: 1452 tacatcgactatccttac 1469
||||||||||||||||||
Sbjct: 1103 tacatcgactatccttac 1120
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 382,736
Number of extensions: 11578
Number of successful extensions: 11578
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11577
Number of HSP's successfully gapped: 1
Length of query: 1996
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1979
Effective length of database: 8,119,229
Effective search space: 16067954191
Effective search space used: 16067954191
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)