BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16939 (UTR included)
(2401 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B2D09 1578 0.0
>BF01060B2D09
Length = 808
Score = 1578 bits (796), Expect = 0.0
Identities = 805/808 (99%)
Strand = Plus / Plus
Query: 1483 ctacatacgatggtacgtgcatcgcgtggtcagtatgctggtggctggctggccggtcgt 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctacatacgatggtacgtgcatcgcgtggtcagtatgctggtggctggctggccggtcgt 60
Query: 1543 gtcgcacgctgttctcaactcactatcactcgctagtccatcacctggctgatcatcccg 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcgcacgctgttctcaactcactatcactcgctagtccatcacctggctgatcatcccg 120
Query: 1603 ccgtacttttaggacatatggcgtgcatggtagagaccgacgaatctgccccggatggtg 1662
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 ccgtacttttaggacatatggcgtgcatggtagagaccgacgaatcagccccggatggtg 180
Query: 1663 accatataccggaggaaacgataacctttttgtacaaactctcccccggtgcctgtccga 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accatataccggaggaaacgataacctttttgtacaaactctcccccggtgcctgtccga 240
Query: 1723 agtcatacggcttcaacgcggcgcggctagcggggatcccccgggaaataacgcaacgcg 1782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtcatacggcttcaacgcggcgcggctagcggggatcccccgggaaataacgcaacgcg 300
Query: 1783 cacacacgatatcacgcaacctggagagcgaggcgacgtgtgtacgcgcctttagagatg 1842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cacacacgatatcacgcaacctggagagcgaggcgacgtgtgtacgcgcctttagagatg 360
Query: 1843 tcatcaaaacggacaacgcggctgagttgaggaaaatattgtcagccctgaccatataat 1902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcatcaaaacggacaacgcggctgagttgaggaaaatattgtcagccctgaccatataat 420
Query: 1903 gatttttttatttccactttaaattgtaccttataggcgaaacaaaatgaatcccacctc 1962
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 421 gatttttttatttccactttaaattgtaccttataggcgaaacaaaatgaaacccacctc 480
Query: 1963 aatagctgttgatattaattataagcaataataataagaatggatctttataaagatttt 2022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatagctgttgatattaattataagcaataataataagaatggatctttataaagatttt 540
Query: 2023 gaaatgcgatttcttgttgaaagtgattttaaattgttaccttttttggtggccctgcta 2082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaaatgcgatttcttgttgaaagtgattttaaattgttaccttttttggtggccctgcta 600
Query: 2083 ttcaaacgctgctgggcagaaaatagtattaggtttttgtgttacccaacttgttaaaaa 2142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcaaacgctgctgggcagaaaatagtattaggtttttgtgttacccaacttgttaaaaa 660
Query: 2143 ttatttgtgattcacttctatcttaatttcaaatgtatgattaaacttcattttagacac 2202
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttatttgagattcacttctatcttaatttcaaatgtatgattaaacttcattttagacac 720
Query: 2203 taagaatttttgttagaaatcataaaatatatactcggagagtatcaacatacccaccta 2262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taagaatttttgttagaaatcataaaatatatactcggagagtatcaacatacccaccta 780
Query: 2263 ctttttttaaattactatctttgtaatc 2290
||||||||||||||||||||||||||||
Sbjct: 781 ctttttttaaattactatctttgtaatc 808
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 265,178
Number of extensions: 5022
Number of successful extensions: 5022
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5022
Number of HSP's successfully gapped: 1
Length of query: 2401
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2384
Effective length of database: 8,119,229
Effective search space: 19356241936
Effective search space used: 19356241936
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)