BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16944 (UTR included)
(2158 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2316_C1 1213 0.0
>BF14_2316_C1
Length = 998
Score = 1213 bits (612), Expect = 0.0
Identities = 618/620 (99%)
Strand = Plus / Plus
Query: 445 tgcagaataacagagtttcgtcacctggatactgtgtctgttgcagaacttgcaacatgt 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgcagaataacagagtttcgtcacctggatactgtgtctgttgcagaacttgcaacatgt 61
Query: 505 ggtgctggagagccttcaaatggcttccagtattgcttattgtgtcgattgtgacatggt 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggtgctggagagccttcaaatggcttccagtattgcttattgtgtcgattgtgacatggt 121
Query: 565 cttattatgcatacgttatacagctatgcatttttactattgatggtacagcccaaaagt 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cttattatgcatacgttatacagctatgcatttttactattgatggtacagcccaaaagt 181
Query: 625 gtatatatctagtgctatatcatattctactaataatgtttttatggtcctattggcgca 684
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 182 gtatatatctagtgctatatcatattcttctaataatgtttttatggtcctattggcgca 241
Query: 685 ccatttttgcagatatcaaacctattccagacaagtataagttacctgaaacagaactgg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccatttttgcagatatcaaacctattccagacaagtataagttacctgaaacagaactgg 301
Query: 745 aaaaattgctcagtgcggagacggaagatggacaaaggacaatcttagagaactttgcta 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaaaattgctcagtgcggagacggaagatggacaaaggacaatcttagagaactttgcta 361
Query: 805 aagatctccctatagtaactaggacaatgtcaggctccgtgcggtattgtaaccgttgtg 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aagatctccctatagtaactaggacaatgtcaggctccgtgcggtattgtaaccgttgtg 421
Query: 865 ttctagtcaagcctgatcgtgcacatcattgcagtatctgtgctcgatgtgtcctcaaaa 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttctagtcaagcctgatcgtgcacatcattgcagtatctgtgctcgatgtgtcctcaaaa 481
Query: 925 tggatcatcattgcccatgggtcaataactgtgtgtgcttccataactacaagttcttca 984
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tggatcatcattgcccgtgggtcaataactgtgtgtgcttccataactacaagttcttca 541
Query: 985 tgctattcctcggctacgcactgttgtactgcctcttcattatgtctacttgcctaccat 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgctattcctcggctacgcactgttgtactgcctcttcattatgtctacttgcctaccat 601
Query: 1045 attttatacgcttttggaag 1064
||||||||||||||||||||
Sbjct: 602 attttatacgcttttggaag 621
Score = 720 bits (363), Expect = 0.0
Identities = 372/375 (99%)
Strand = Plus / Plus
Query: 1149 ggtgactttggcacatcaggcagtgccggtcgttaccacatagtgttcgccttctttgtg 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ggtgactttggcacatcaggcagtgccggtcgttaccacatagtgttcgccttctttgtg 681
Query: 1209 gccttaatgtttgccatatcacttggctctttatttggctaccactgctacctcgtagcc 1268
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 682 gccttaatgtttgccatatcacttggctccttatttggctaccactgctacctcgtagcc 741
Query: 1269 cacaacaggactacattggaggccttcagagcgccgatgttccgtggcggagctgataaa 1328
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 742 cacaacaggactacattggaggccttcagagcgccgatgttccgtggcggagctgacaaa 801
Query: 1329 aacggcttctcgattggagctttcaataacttcaaagaagtatttggtgccagccctgat 1388
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 aacggcttctcgattggagctttcaataacttcaaagaagtatttggtgccagccctgac 861
Query: 1389 ctgtgggccattccggtattcaccagcctgggcgacggatgcgagtaccctgtgcggcgc 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 ctgtgggccattccggtattcaccagcctgggcgacggatgcgagtaccctgtgcggcgc 921
Query: 1449 gagcatcagctgcagacgttcacgacgccacaggacggcggcggctacgagtccatgggc 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 gagcatcagctgcagacgttcacgacgccacaggacggcggcggctacgagtccatgggc 981
Query: 1509 accacgcgctccagc 1523
|||||||||||||||
Sbjct: 982 accacgcgctccagc 996
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 302,110
Number of extensions: 18475
Number of successful extensions: 18475
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 18475
Number of HSP's successfully gapped: 2
Length of query: 2158
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2141
Effective length of database: 8,119,229
Effective search space: 17383269289
Effective search space used: 17383269289
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)