BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16947 (UTR included)
(1705 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B1C07 1378 0.0
BF01021B1E04 946 0.0
>BF01021B1C07
Length = 726
Score = 1378 bits (695), Expect = 0.0
Identities = 719/726 (99%), Gaps = 1/726 (0%)
Strand = Plus / Plus
Query: 408 tacattactgctttgcatacttagtatttatatg-tattgtgaacaatgttattatcaaa 466
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 tacattactgctttgcatacttagtatttatatnntattgtgaacaatgttattatcaaa 60
Query: 467 agcaatcgtttatagtaaacataacttttcaagaatgaattttctactgaactgcataaa 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcaatcgtttatagtaaacataacttttcaagaatgaattttctactgaactgcataaa 120
Query: 527 aagacttaaaagttcacaacaatggctgaatcgtcagaaagctgatccttatgtagaaaa 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagacttaaaagttcacaacaatggctgaatcgtcagaaagctgatccttatgtagaaaa 180
Query: 587 agcaaagatgtgtaattacagatgtcgtagtgcttttaaactaatagaaatgaatgaaaa 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcaaagatgtgtaattacagatgtcgtagtgcttttaaactaatagaaatgaatgaaaa 240
Query: 647 ggcaaatatacttcatcctggtcaaaccgtcatagaccttggagcttcacctggctcatg 706
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 241 ggcaaatatacttcatcctggtcaaaccgtcatagaccttggagcttcacccggctcatg 300
Query: 707 gactcaagtggcagttcagaaaacaaatgctgacggcgctgattcctcaaaaccgaaagg 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gactcaagtggcagttcagaaaacaaatgctgacggcgctgattcctcaaaaccgaaagg 360
Query: 767 gacagttttggctgtagataaactacaaatattcccaatcgagggagccacaataatgag 826
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 361 gacagttttggctgtagataaactacaaatattcccaatcgagggagctacaataatgag 420
Query: 827 taacttggatttctcaaccattcaagctcatgacaaagttttgaaagctcttaatgggaa 886
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 421 taacttggatttctcaaccattgaagctcatgacaaagttttgaaagctcttaatggaaa 480
Query: 887 gaaagtggatttagtgctatcagatatggcaccaagtgcgactggtgtcagggaactaga 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaagtggatttagtgctatcagatatggcaccaagtgcgactggtgtcagggaactaga 540
Query: 947 caaggaccgcataataggtttatgttacatggcaataagatttgcggcattagttactag 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caaggaccgcataataggtttatgttacatggcaataagatttgcggcattagttactag 600
Query: 1007 aattgatggtaacttgctatttaaagtatgggatggtaaagaagtgcccatactagaaat 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aattgatggtaacttgctatttaaagtatgggatggtaaagaagtgcccatactagaaat 660
Query: 1067 ggatctagaaagattctataaacatataaagattttgaaacccaatgcaagtaggtcgga 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 661 ggatctagaaagattctataaacatataaagattttgaaacccaatgcaagtaggtcaga 720
Query: 1127 ctcatc 1132
||||||
Sbjct: 721 ctcatc 726
>BF01021B1E04
Length = 774
Score = 946 bits (477), Expect = 0.0
Identities = 498/505 (98%)
Strand = Plus / Plus
Query: 606 agatgtcgtagtgcttttaaactaatagaaatgaatgaaaaggcaaatatacttcatcct 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 agatgtcgtagtgcttttaaactaatagaaatgaatgaaaaggcaaatatacttcatcct 329
Query: 666 ggtcaaaccgtcatagaccttggagcttcacctggctcatggactcaagtggcagttcag 725
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 330 ggtcaaaccgtcatagaccttggagcttcacccggctcatggactcaagtggcagttcag 389
Query: 726 aaaacaaatgctgacggcgctgattcctcaaaaccgaaagggacagttttggctgtagat 785
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aaaacaaatgctgacggtgctgattcctcaaaaccgaaagggacagttttggctgtagat 449
Query: 786 aaactacaaatattcccaatcgagggagccacaataatgagtaacttggatttctcaacc 845
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 450 aaactacaaatattcccaatccagggagctacaataatgagtaacttggatttctcaacc 509
Query: 846 attcaagctcatgacaaagttttgaaagctcttaatgggaagaaagtggatttagtgcta 905
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 attgaagctcatgacaaagttttgaaagctcttaatgggaagaaagtggatttagtgcta 569
Query: 906 tcagatatggcaccaagtgcgactggtgtcagggaactagacaaggaccgcataataggt 965
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tcagatatggcaccgagtgcgactggtgtcagggaactagacaaggaccgcataataggt 629
Query: 966 ttatgttacatggcaataagatttgcggcattagttactagaattgatggtaacttgcta 1025
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 630 ttatgttacatggcaataagatttgcagcattagttactagaattgatggtaacttgcta 689
Query: 1026 tttaaagtatgggatggtaaagaagtgcccatactagaaatggatctagaaagattctat 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tttaaagtatgggatggtaaagaagtgcccatactagaaatggatctagaaagattctat 749
Query: 1086 aaacatataaagattttgaaaccca 1110
|||||||||||||||||||||||||
Sbjct: 750 aaacatataaagattttgaaaccca 774
Score = 369 bits (186), Expect = e-101
Identities = 189/190 (99%)
Strand = Plus / Plus
Query: 418 ctttgcatacttagtatttatatgtattgtgaacaatgttattatcaaaagcaatcgttt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 ctttgcatacttagtatttatatgtattgtgaacaatgttattatcaaaagcaatcgttt 76
Query: 478 atagtaaacataacttttcaagaatgaattttctactgaactgcataaaaagacttaaaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atagtaaacataacttttcaagaatgaattttctactgaactgcataaaaagacttaaaa 136
Query: 538 gttcacaacaatggctgaatcgtcagaaagctgatccttatgtagaaaaagcaaagatgt 597
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 137 gttcacaacaatggctgaatcgtcagaaagctgatccttatgtggaaaaagcaaagatgt 196
Query: 598 gtaattacag 607
||||||||||
Sbjct: 197 gtaattacag 206
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,558
Number of extensions: 6242
Number of successful extensions: 6242
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6241
Number of HSP's successfully gapped: 3
Length of query: 1705
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1688
Effective length of database: 8,119,229
Effective search space: 13705258552
Effective search space used: 13705258552
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)