BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16954 (UTR included)
(1450 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B1D11 168 2e-41
BF01047B2H03 157 6e-38
BF01019A1H08 127 5e-29
BF14_335_C4 111 3e-24
BF01049B1F01 100 1e-20
BF14_335_C2 100 1e-20
BF01056B2D01 84 7e-16
BF01016A2B02 76 2e-13
BF01016B1E06 74 7e-13
BF01044B1A07 70 1e-11
BF01045B1A06 70 1e-11
BF14_335_C5 70 1e-11
>BF01060B1D11
Length = 799
Score = 168 bits (85), Expect = 2e-41
Identities = 253/304 (83%), Gaps = 5/304 (1%)
Strand = Plus / Minus
Query: 372 ctatgattttaataaaacccttttgtcagaattagatgcaggcgtcataaagatgttgaa 431
|||||||||||||||||||||||| || |||||| || | | |||||||| |||||||
Sbjct: 711 ctatgattttaataaaacccttttatctgaattaagtgtcg-cttcataaag-tgttgaa 654
Query: 432 gttatgcctcgagctcgcgttatcggctgattcatcagctttagcttcagggatcgcaat 491
|| || ||| ||||||| |||| ||||| | || |||||| | ||||||||||||
Sbjct: 653 tttgtggctccggctcgcgacatcgactgatacgtcggctttaatt--agggatcgcaat 596
Query: 492 aattttgggatgagtctaaaaaggccatcggagctttataaacaccttagagtttccaaa 551
| ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||
Sbjct: 595 agttttgggatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaag 536
Query: 552 agatatatcctggggaaaacccatgatgccgtcgttatatcactcccaaaacacaaagat 611
||| |||||| ||||||| ||||| ||| ||| ||| ||||||||||||| | ||||
Sbjct: 535 agacatatcccggggaaagcccataatgatgtcattacatcactcccaaaaaccggagat 476
Query: 612 gacctagagctagaatc-aagacttcgattccataaacagtttatgataggggcacaaag 670
| || ||| ||| | || ||||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 475 ggcccagaactaaagtctgagacttcaattccacaaacagtttatgataggagcacaaag 416
Query: 671 taac 674
||||
Sbjct: 415 taac 412
>BF01047B2H03
Length = 758
Score = 157 bits (79), Expect = 6e-38
Identities = 151/175 (86%)
Strand = Plus / Minus
Query: 500 gatgagtctaaaaaggccatcggagctttataaacaccttagagtttccaaaagatatat 559
||||||||||||||||||||||||||| ||||||||| | ||||||||||| ||| ||||
Sbjct: 758 gatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatat 699
Query: 560 cctggggaaaacccatgatgccgtcgttatatcactcccaaaacacaaagatgacctaga 619
|| ||||||| ||||| ||| ||| ||| ||||||| ||||| | | ||||| || ||
Sbjct: 698 cccggggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctga 639
Query: 620 gctagaatcaagacttcgattccataaacagtttatgataggggcacaaagtaac 674
||| | |||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 638 actaaagtcaagacttcaattccataaacagtttatgataggagcacaaagtaac 584
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 684 gaggcagttgaaactgctaagcacttgctggtgggttgtaggctactcctggatagcggt 743
|||||||||| || |||| |||| |||||| |||| ||||||||||||||||||||||||
Sbjct: 346 gaggcagttggaattgctgagcatttgctgatgggatgtaggctactcctggatagcggt 287
Query: 744 caatact 750
|||||||
Sbjct: 286 caatact 280
>BF01019A1H08
Length = 504
Score = 127 bits (64), Expect = 5e-29
Identities = 85/92 (92%)
Strand = Plus / Minus
Query: 807 cccttaaacctacgcctgggccgcaagtcccaggcactgttgaagctcctctccctgcaa 866
||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 480 cccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaa 421
Query: 867 cgcgatggttccggcactcgcacggcgaatcc 898
|||||||| ||||||| ||||||| ||||||
Sbjct: 420 cgcgatggacccggcacccgcacggtgaatcc 389
>BF14_335_C4
Length = 1491
Score = 111 bits (56), Expect = 3e-24
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 807 cccttaaacctacgcctgggccgcaagtcccaggcactgttgaagctcctctccctgcaa 866
||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 1249 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaa 1307
Query: 867 cgcgatggttccggcactcgcacggcgaatcc 898
||||||||| || ||| ||||||| ||||||
Sbjct: 1308 cgcgatggtccccgcaaccgcacggtgaatcc 1339
>BF01049B1F01
Length = 840
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 807 cccttaaacctacgcctgggccgcaagtcccaggcactgttgaagctcctctccctgcaa 866
|||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 648 cccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaa 589
Query: 867 cg 868
||
Sbjct: 588 cg 587
>BF14_335_C2
Length = 1827
Score = 99.6 bits (50), Expect = 1e-20
Identities = 98/114 (85%)
Strand = Plus / Minus
Query: 809 cttaaacctacgcctgggccgcaagtcccaggcactgttgaagctcctctccctgcaacg 868
||||||||||| |||| | ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 869 cgatggttccggcactcgcacggcgaatccttgggatgttaaaaggtttcgtct 922
|| || ||||||| ||||||| |||||| | | | | ||| |||||||||||
Sbjct: 862 cggcggacccggcacccgcacggtgaatccatagaaagctaagaggtttcgtct 809
>BF01056B2D01
Length = 728
Score = 83.8 bits (42), Expect = 7e-16
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 833 gtcccaggcactgttgaagctcctctccctgcaacgcgatggttccggcactcgcacggc 892
||||||||| |||||||||||||||||||||||| | ||||| ||||||| |||||||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 893 gaatccttgggatgttaaaaggtttcgtct 922
|||| | ||| ||||| | |||||||||||
Sbjct: 106 gaattcatggaatgttgagaggtttcgtct 77
>BF01016A2B02
Length = 780
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 809 cttaaacctacgcctgggccgcaagtcccaggcactgttgaagctcctctccctgcaacg 868
||||| ||||| |||| | ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 283 cttaagcctacacctgagtcgcaattcccaggcactgttgaagctcctctcccttcaacg 224
Query: 869 cg 870
||
Sbjct: 223 cg 222
>BF01016B1E06
Length = 606
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 807 cccttaaacctacgcctgggccgcaagtcccaggcactgttgaagctcctctccctgcaa 866
||||||||||||| |||||| ||| | |||| ||||||||||||||||||||| ||||||
Sbjct: 253 cccttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctctgcaa 194
Query: 867 c 867
|
Sbjct: 193 c 193
>BF01044B1A07
Length = 806
Score = 69.9 bits (35), Expect = 1e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 832 agtcccaggcactgttgaagctcctctccctgcaacgcgatggttccggcactcgcacgg 891
|||||||| ||| |||||||||||||||||||| ||||||||| ||| ||| |||||||
Sbjct: 518 agtcccagacacagttgaagctcctctccctgccacgcgatggacccgccacccgcacgg 459
Query: 892 cgaatcc 898
||||||
Sbjct: 458 tgaatcc 452
>BF01045B1A06
Length = 820
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 830 caagtcccaggcactgttgaagctcctctccctgcaacgcgatggttccggcactcgcac 889
||||||| |||||||||||||||||||||||||||||| | |||| || |||| ||||
Sbjct: 748 caagtccaaggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgcat 689
Query: 890 ggcgaatcctt 900
|| ||||||||
Sbjct: 688 ggtgaatcctt 678
>BF14_335_C5
Length = 1597
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 828 cgcaagtcccaggcactgttgaagctcctctccctgcaa 866
||||||||||||||||||||||||||||||||| |||||
Sbjct: 1518 cgcaagtcccaggcactgttgaagctcctctccgtgcaa 1556
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 217,752
Number of extensions: 5868
Number of successful extensions: 5868
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 5866
Number of HSP's successfully gapped: 13
Length of query: 1450
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1433
Effective length of database: 8,119,229
Effective search space: 11634855157
Effective search space used: 11634855157
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)