BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16982 (UTR included)
(2332 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2060_C1 3182 0.0
>BF14_2060_C1
Length = 2068
Score = 3182 bits (1605), Expect = 0.0
Identities = 1651/1668 (98%)
Strand = Plus / Plus
Query: 418 gccacatcagctacaatagaacaactgaaagaaagtgtatcaaagttaaaattgccaaaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gccacatcagctacaatagaacaactgaaagaaagtgtatcaaagttaaaattgccaaaa 460
Query: 478 gaacacacgcctagaatataacaatggctgataaaataaagaagttttttcaaaagaaaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gaacacacgcctagaatataacaatggctgataaaataaagaagttttttcaaaagaaaa 520
Query: 538 aaattgatgctaagttcaagttagctggacccgggcataaattaactgaatcatctcaat 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aaattgatgctaagttcaagttagctggacccgggcataaattaactgaatcatctcaat 580
Query: 598 caagccagtcttctttttataaaaaagaagttcctacagtaaaaagatcagggctgtcag 657
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 caagccagtcttctttctataaaaaagaagttcctacagtaaaaagatcagggctgtcag 640
Query: 658 aggaaagtaaagtagcagccgatgctgcattggcaagattacaacaaaaaagagacaacc 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aggaaagtaaagtagcagccgatgctgcattggcaagattacaacaaaaaagagacaacc 700
Query: 718 cttcctttaacacatctttggctgctataaaggctcaagtgaagaaagaattggagaatg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 cttcctttaacacatctttggctgctataaaggctcaagtgaagaaagaattggagaatg 760
Query: 778 aagtagcatcttcttcaaaagaaccaattcaagtgaaagaaactactgaaggaaatgtag 837
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 761 aagtagcatcttcttcaaaagaaccaattcaagtgaaagaaaatactgaaggaaatgtag 820
Query: 838 acattcctaaaaacttggccgcgtctggtgtatactttaaatgtcctataataagcaatg 897
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 acgttcctaaaaacttggccgcgtctggtgtatactttaaatgtcctataataagcaatg 880
Query: 898 atattctgtctcgggatgaatggaagaaaaatattaagacttttttgtatgaacaattag 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 881 atattctgtctcgggatgaatggaagaaaaatattaagacttttttgtatgaacagttgg 940
Query: 958 aagaagaaagaggtcttactgcatgtcttataatacagtcctgtaatagcaatagagaga 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 aagaagaaagaggtcttactgcatgtcttataatacagtcctgtaatagcaatagagaga 1000
Query: 1018 aggttgatatatgcgtggaaactctatgcaagtatttagaaaatattgtgacacatcccg 1077
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 aggttgatatatgtgtggaaactctatgcaagtatttagaaaatattgtgacacatcccg 1060
Query: 1078 atgatgaaaagtatcagaagattcgaatgagcaacagagcattttgcgaaagagtccaac 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 atgatgaaaagtatcagaagattcgaatgagcaacagagcattttgcgaaagagtccaac 1120
Query: 1138 ccattgaaggctcgatggaattattattggcagcgggtttcatgcaagaaaaacttttga 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 ccattgaaggctcgatggaattattattggcagcgggtttcatgcaagaaaaacttttga 1180
Query: 1198 ataatgaaggcaatgaagaagattttttagtttttaaaaaggaaaatattccttcagttg 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 ataatgaaggcaatgaagaagattttttagtttttaaaaaggaaaatattccttcagttg 1240
Query: 1258 aaagcttgactatgttgatagatgctctacgtacatcggaaccgattccattggaacttg 1317
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 1241 aaagcttgactatgttgatagacgctctacgtacatcggaaccaattccattggaacttg 1300
Query: 1318 acaggaatctccaagtattgttaccttctcaagcagccaataaagtgcaattaccgagtt 1377
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1301 acaggaatctccaagtactgttaccttctcaagcagccaataaagtacaattaccgagtt 1360
Query: 1378 cattctacgcgcttagtccagaagaaattaagagagaacaacaattgagaaccgaagcca 1437
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1361 cattctacgcgcttagtccagaagaaattaaaagagaacaacaattgagaaccgaagcca 1420
Query: 1438 tggaaagaagtcaaatgctacgaactaaagcgatgagggaaaaggacgaattacgtgaaa 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 tggaaagaagtcaaatgctacgaactaaagcgatgagggaaaaggacgaattacgtgaaa 1480
Query: 1498 tgagaaaatataaatttgcgattataagagtgcgtttccctgacggaatattgttgcaag 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1481 tgagaaaatataaatttgcgattataagagtgcgtttccctgacggaatattgttgcaag 1540
Query: 1558 gcacattttcggtgtacgagcgttatagtgaaatacatgaattcgttcaagaaaatttgg 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1541 gcacattttcggtgtacgagcgttatagtgaaatacatgaattcgttcaagaaaatttgg 1600
Query: 1618 aacacaacggccttccgtttatactgaacactccaaccggccacaagataatatatgaag 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1601 aacacaacggccttccgtttatactgaacactccaaccggccacaagataatatatgaag 1660
Query: 1678 aagatgcgaataaaactcttatagatctaagacttgtaccaacaacaatgctcacattcg 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1661 aagatgcgaataaaactcttatagatctaagacttgtaccaacaacaatgctcacattcg 1720
Query: 1738 cctggcacagttcagtcatagacgaaatcaataacagccctaataaggacgtttatttga 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 cctggcacagttcagtcatagacgaaatcaataacagccctaataaggacgtttatttga 1780
Query: 1798 aaccggaagtcatggtcctcgtacaagaaatttgactatattcaaagcaaatttaacatg 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1781 aaccggaagtcatggtcctcgtacaagaaatttgactatattcaaagcaaatttaacatg 1840
Query: 1858 aaaattaacgaataaaaaaaatttatgttccaatattattttaataagacgttcatatgc 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1841 aaaattaacgaataaaaaaaatttatgttccaatattattttaataagacgttcatatgc 1900
Query: 1918 tttaagactgccttcaataaaataactgtttaaaatgtcacttaatatatacacatatag 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1901 tttaagactgccttcaataaaataactgtttaaaatgtcacttaatatatacacatatag 1960
Query: 1978 cttgttagtaagaaatgccttcacaatgagactcatattagcaataataatgcttctggt 2037
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1961 cttgttagtannnnntgccttcacaatgagactcgtattagcaataataatgcttctggt 2020
Query: 2038 aacaaattttatatgaacaatgagggaaaattaaataaatgtacaatg 2085
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 aacaaattttatatgaacaatgagggaaaattaaataaatgtacaatg 2068
Score = 377 bits (190), Expect = e-104
Identities = 193/194 (99%)
Strand = Plus / Plus
Query: 1 aaatttgccgaaaacaatcgttaatatcggcgaactatctttatacgaagagatagctga 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 208 aaatttgccgaaaacaatcgttaatatcggcgagctatctttatacgaagagatagctga 267
Query: 61 aatattttacttcaacgagttccagtgtttattgttgaagacgttttccttaattctttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aatattttacttcaacgagttccagtgtttattgttgaagacgttttccttaattctttt 327
Query: 121 gtttacattactattgattttcatttcttggagggtgtacggcaatcgtatatccgaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtttacattactattgattttcatttcttggagggtgtacggcaatcgtatatccgaacg 387
Query: 181 gtttatgaggccgg 194
||||||||||||||
Sbjct: 388 gtttatgaggccgg 401
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 358,008
Number of extensions: 19608
Number of successful extensions: 19608
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19608
Number of HSP's successfully gapped: 2
Length of query: 2332
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2315
Effective length of database: 8,119,229
Effective search space: 18796015135
Effective search space used: 18796015135
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)