BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16984 (UTR included)
(1393 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 198 2e-50
BF14_335_C2 161 4e-39
BF14_335_C4 149 1e-35
BF01014B2F02 123 8e-28
BF01044B1A07 115 2e-25
BF01056B2D01 113 8e-25
BF01049B1F01 100 1e-20
BF01016A2B02 92 3e-18
BF14_335_C5 92 3e-18
BF01048A1E04 90 1e-17
BF01045B1A06 90 1e-17
BF01016B1E06 74 7e-13
BF14_2442_C1 74 7e-13
BF01044A1D01 70 1e-11
BF01017A1F03 68 4e-11
>BF01019A1H08
Length = 504
Score = 198 bits (100), Expect = 2e-50
Identities = 109/112 (97%)
Strand = Plus / Minus
Query: 477 cccttaaacctacacctgggtcgcatgtcccaggcactgttcaagctcctctccctgcaa 536
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 480 cccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaa 421
Query: 537 cgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttc 369
>BF14_335_C2
Length = 1827
Score = 161 bits (81), Expect = 4e-39
Identities = 105/113 (92%)
Strand = Plus / Minus
Query: 479 cttaaacctacacctgggtcgcatgtcccaggcactgttcaagctcctctccctgcaacg 538
|||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 539 cgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcgtc 591
|| |||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 862 cggcggacccggcacccgcacggtgaatccatagaaagctaagaggtttcgtc 810
>BF14_335_C4
Length = 1491
Score = 149 bits (75), Expect = 1e-35
Identities = 106/115 (92%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 477 cccttaaacctacacctgggtcgcatgtcccaggcactgttcaagctcctctccctgcaa 536
||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||
Sbjct: 1249 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaa 1307
Query: 537 cgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcgtc 591
|||||||| ||| ||| ||||||||||||||||| ||||||| |||| |||||||
Sbjct: 1308 cgcgatggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtc 1362
>BF01014B2F02
Length = 623
Score = 123 bits (62), Expect = 8e-28
Identities = 95/105 (90%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 487 tacacctgggtcgcatgtcccaggcactgttcaagctcctctccctgcaacgcgatggac 546
||||||||||||||| |||| |||| ||| | ||||||||||||||||||||| |||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggac 566
Query: 547 ccggcacccgcacggtgaatccattgaatgctaagaggtttcgtc 591
||||||||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 565 ccggcacccgcacggtgcatccactgaatgctgagaggtttcgtc 521
>BF01044B1A07
Length = 806
Score = 115 bits (58), Expect = 2e-25
Identities = 91/102 (89%)
Strand = Plus / Minus
Query: 488 acacctgggtcgcatgtcccaggcactgttcaagctcctctccctgcaacgcgatggacc 547
|||||||| |||| ||||||| ||| ||| |||||||||||||||| ||||||||||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 548 cggcacccgcacggtgaatccattgaatgctaagaggtttcg 589
|| |||||||||||||||||||||||| ||| ||| ||||||
Sbjct: 472 cgccacccgcacggtgaatccattgaacgctgagaagtttcg 431
>BF01056B2D01
Length = 728
Score = 113 bits (57), Expect = 8e-25
Identities = 81/89 (91%)
Strand = Plus / Minus
Query: 503 gtcccaggcactgttcaagctcctctccctgcaacgcgatggacccggcacccgcacggt 562
||||||||| ||||| |||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 563 gaatccattgaatgctaagaggtttcgtc 591
|||| ||| ||||| | ||||||||||||
Sbjct: 106 gaattcatggaatgttgagaggtttcgtc 78
>BF01049B1F01
Length = 840
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 477 cccttaaacctacacctgggtcgcatgtcccaggcactgttcaagctcctctccctgcaa 536
|||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 648 cccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaa 589
Query: 537 cg 538
||
Sbjct: 588 cg 587
>BF01016A2B02
Length = 780
Score = 91.7 bits (46), Expect = 3e-18
Identities = 80/90 (88%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 479 cttaaacctacacctgggtcgcatgtcccaggcactgttcaagctcctctccctgcaacg 538
||||| |||||||||| |||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 283 cttaagcctacacctgagtcgcaattcccaggcactgttgaagctcctctcccttcaacg 224
Query: 539 cgatggacccggcacccgcacggtgaatcc 568
|| |||||||||| | |||||||||||||
Sbjct: 223 cgcgggacccggca-cagcacggtgaatcc 195
>BF14_335_C5
Length = 1597
Score = 91.7 bits (46), Expect = 3e-18
Identities = 80/92 (86%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 478 ccttaaacctacacctgggtcgcatgtcccaggcactgttcaagctcctctccctgcaac 537
|||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaa- 1556
Query: 538 gcgatggacccggcacccgcacggtgaatcca 569
|||| |||||||||||||||||||||||||
Sbjct: 1557 -agatgcacccggcacccgcacggtgaatcca 1587
>BF01048A1E04
Length = 789
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 535 aacgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcgtc 591
|||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 1 aacgcgatggacccggcacccgcacggtgaatccatggaaagataagaggtttcgtc 57
>BF01045B1A06
Length = 820
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 503 gtcccaggcactgttcaagctcctctccctgcaacgcgatggacccggcacccgcacggt 562
|||| |||||||||| ||||||||||||||||||| | |||||||| ||||||||| |||
Sbjct: 745 gtccaaggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgcatggt 686
Query: 563 gaatccattgaat 575
|||||| ||||||
Sbjct: 685 gaatcctttgaat 673
>BF01016B1E06
Length = 606
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 477 cccttaaacctacacctgggtcgcatgtcccaggcactgttcaagctcctctccctgcaa 536
|||||||||||||||||||||||| |||| ||||||||| ||||||||||| ||||||
Sbjct: 253 cccttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctctgcaa 194
Query: 537 c 537
|
Sbjct: 193 c 193
>BF14_2442_C1
Length = 801
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 519 aagctcctctccctgcaacgcgatggacccggcacccgcacggtgaatccattgaatgct 578
|||||||||||||||||||| || || || ||| || |||||||||||||| |||||||
Sbjct: 674 aagctcctctccctgcaacg--attgatccagcaaccacacggtgaatccatggaatgct 731
Query: 579 aagaggtttcgt 590
||||||||||||
Sbjct: 732 aagaggtttcgt 743
>BF01044A1D01
Length = 742
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 549 ggcacccgcacggtgaatccattgaatgctaagaggtttcgtc 591
||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 738 ggcacccgcacggtgaagccattgaatgctgagaggtttcgtc 696
>BF01017A1F03
Length = 782
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 538 gcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcgtc 591
|||| ||||||||||||||||||||| |||||| ||||||| ||||| ||||||
Sbjct: 291 gcgacggacccggcacccgcacggtgtatccatggaatgctgagaggattcgtc 344
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 163,376
Number of extensions: 3905
Number of successful extensions: 3905
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 3900
Number of HSP's successfully gapped: 15
Length of query: 1393
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1376
Effective length of database: 8,119,229
Effective search space: 11172059104
Effective search space used: 11172059104
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)