BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16999 (UTR included)
(1201 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B1F01 103 6e-22
BF01019A1H08 103 6e-22
BF01014B2F02 98 4e-20
BF14_335_C4 96 2e-19
BF14_3046_C1 92 2e-18
BF14_335_C2 88 4e-17
BF01024A2B03 84 6e-16
BF01016B1E06 78 4e-14
BF01016A2B02 76 1e-13
BF01044A1D01 72 2e-12
BF01056B2D01 70 9e-12
BF01044B1A07 70 9e-12
BF01049B2B11 68 4e-11
>BF01049B1F01
Length = 840
Score = 103 bits (52), Expect = 6e-22
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 592 acctacacctgggtcgcgagtcccaggcactgttgaagctcctctccctgcaacga 647
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 641 acctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacga 586
>BF01019A1H08
Length = 504
Score = 103 bits (52), Expect = 6e-22
Identities = 98/111 (88%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 591 aacctacacctgggtcgcgagtcccaggcactgttgaagctcctctccctgcaa--cgat 648
|||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||
Sbjct: 474 aacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgcgat 415
Query: 649 gg-cccgacaccagcacgggaaatccatggaatgctgataggtttcgtctc 698
|| |||| |||| |||||| ||||||| ||||||| | ||||||| ||||
Sbjct: 414 ggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctc 364
>BF01014B2F02
Length = 623
Score = 97.6 bits (49), Expect = 4e-20
Identities = 95/109 (87%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 595 tacacctgggtcgcgagtcccaggcactgttgaagctcctctccctgcaacgatgg-ccc 653
|||||||||||||| ||||| |||| ||| |||||||||||||||||||||| ||| |||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggaccc 564
Query: 654 gacaccagcacgggaaatccatggaatgctgataggtttcgtctctaga 702
| |||| |||||| ||||| ||||||||| ||||||||||||||||
Sbjct: 563 ggcacccgcacggtgcatccactgaatgctgagaggtttcgtctctaga 515
>BF14_335_C4
Length = 1491
Score = 95.6 bits (48), Expect = 2e-19
Identities = 98/111 (88%), Gaps = 4/111 (3%)
Strand = Plus / Plus
Query: 591 aacctacacctgggtcgcgagtcccaggcactgttgaagctcctctccctgcaa--cgat 648
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 1255 aacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaacgcgat 1313
Query: 649 gg-cccgacaccagcacgggaaatccatggaatgctgataggtttcgtctc 698
|| ||| || | |||||| ||||||||||||||||| || |||||||||
Sbjct: 1314 ggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtctc 1364
>BF14_3046_C1
Length = 1016
Score = 91.7 bits (46), Expect = 2e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 1151 ttcgcactggaatcgtcgaatattttgccaatgtcaacgtttttatttgt 1200
|||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1003 ttcgcactggaatcgtggaatattttgccaatgtcaacgtttttatttgt 954
>BF14_335_C2
Length = 1827
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 591 aacctacacctgggtcgcgagtcccaggcactgttgaagctcctctccctgcaacg 646
|||||||||||| ||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 918 aacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
>BF01024A2B03
Length = 724
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 1155 cactggaatcgtcgaatattttgccaatgtcaacgtttttatttgt 1200
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 308 cactggaatcgttgaatattttgccaatgtcaacgtttttatttgt 263
>BF01016B1E06
Length = 606
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 591 aacctacacctgggtcgcgagtcccaggcactgttgaagctcctctccctgcaac 645
|||||||||||||||||| | |||| ||||||||||||||||||||| |||||||
Sbjct: 247 aacctacacctgggtcgctactccccggcactgttgaagctcctctctctgcaac 193
>BF01016A2B02
Length = 780
Score = 75.8 bits (38), Expect = 1e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 593 cctacacctgggtcgcgagtcccaggcactgttgaagctcctctccctgcaacg 646
|||||||||| ||||| | ||||||||||||||||||||||||||||| |||||
Sbjct: 277 cctacacctgagtcgcaattcccaggcactgttgaagctcctctcccttcaacg 224
>BF01044A1D01
Length = 742
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1154 gcactggaatcgtcgaatattttgccaatgtcaacgtttttatt 1197
||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 203 gcactggaatcgtggaatattctgccaatgtcaacgtttttatt 246
>BF01056B2D01
Length = 728
Score = 69.9 bits (35), Expect = 9e-12
Identities = 78/90 (86%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 611 gtcccaggcactgttgaagctcctctccctgcaa--cgatgg-cccgacaccagcacggg 667
||||||||| |||||||||||||||||||||||| ||||| |||| |||| ||||||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 668 aaatccatggaatgctgataggtttcgtct 697
||| ||||||||| ||| |||||||||||
Sbjct: 106 gaattcatggaatgttgagaggtttcgtct 77
>BF01044B1A07
Length = 806
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 596 acacctgggtcgcgagtcccaggcactgttgaagctcctctccctgc 642
|||||||| ||||||||||||| ||| ||||||||||||||||||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgc 486
>BF01049B2B11
Length = 780
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 1151 ttcgcactggaatcgtcgaatattttgccaatgtcaacgtttttatttgt 1200
||||| |||||||||| ||||||||||| |||||| ||||||||||||||
Sbjct: 78 ttcgctctggaatcgtggaatattttgctaatgtcgacgtttttatttgt 29
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 245,620
Number of extensions: 6652
Number of successful extensions: 6652
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 6650
Number of HSP's successfully gapped: 14
Length of query: 1201
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1184
Effective length of database: 8,119,229
Effective search space: 9613167136
Effective search space used: 9613167136
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)