BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17008 (UTR included)
(5170 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2678_C1 3150 0.0
>BF14_2678_C1
Length = 2014
Score = 3150 bits (1589), Expect = 0.0
Identities = 1607/1613 (99%)
Strand = Plus / Plus
Query: 3558 gaaaaaacaaaatacacgatgcgattaataataaagaagataacggaaactgatgaagga 3617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 gaaaaaacaaaatacacgatgcgattaataataaagaagataacggaaactgatgaagga 134
Query: 3618 gattacttttgtcacgcggaaaatgcatttggcaaaacattacgccctgtgtcggtacga 3677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gattacttttgtcacgcggaaaatgcatttggcaaaacattacgccctgtgtcggtacga 194
Query: 3678 ctgcgagcaaccggcccacatcacaatgtcactgaatgctgcacacagatgaacgtgtcg 3737
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 195 ctgcgagcaaccggcccacatcacaacgtcacggaatgctgcacacagatgaacgtgtcg 254
Query: 3738 tcgtcatgtatcgacgcgtgcagctttcacttggacatggacaacatcatggaccgtcct 3797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tcgtcatgtatcgacgcgtgcagctttcacttggacatggacaacatcatggaccgtcct 314
Query: 3798 gagtgcatgaacgattttgataaactcatgaaatgtgctgctgatggatcagatcaccgt 3857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gagtgcatgaacgattttgataaactcatgaaatgtgctgctgatggatcagatcaccgt 374
Query: 3858 agttgttgtgcttcctggggcgttcctcggaactgcctggaactttgtcgcggcggttcc 3917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agttgttgtgcttcctggggcgttcctcggaactgcctggaactttgtcgcggcggttcc 434
Query: 3918 gtttccaagacttgcgctctccaacatgcaagacgagcattggcctgctttagagactct 3977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gtttccaagacttgcgctctccaacatgcaagacgagcattggcctgctttagagactct 494
Query: 3978 ggtgctaaactaccaggtccaccaagaaacttaaaagcacatgctgcccctacaccaaat 4037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggtgctaaactaccaggtccaccaagaaacttaaaagcacatgctgcccctacaccaaat 554
Query: 4038 actgtgttgctaagctgggagccgcccctaaagaatccgcaaaccgtgtatctttatcgt 4097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 actgtgttgctaagctgggagccgcccctaaagaatccgcaaaccgtgtatctttatcgt 614
Query: 4098 gttttctggcgagcgtatggtgccaaagtccctgagaagttggacacaagtgaaaccagc 4157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gttttctggcgagcgtatggtgccaaagtccctgagaagttggacacaagtgaaaccagc 674
Query: 4158 gtggtactgaccggtctacaggatgatgtgcgttacgaatgcgtggtgaaagctgccaat 4217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gtggtactgaccggtctacaggatgatgtgcgttacgaatgcgtggtgaaagctgccaat 734
Query: 4218 gatgcgggtacatcatctctcagccagtcaatcatgtttacgactgctggtcaggagacg 4277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gatgcgggtacatcatctctcagccagtcaatcatgtttacgactgctggtcaggagacg 794
Query: 4278 ggggcatcagcttctaaagtgtcgacttctggaacagcctccgcagtgggagtagcggtg 4337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ggggcatcagcttctaaagtgtcgacttctggaacagcctccgcagtgggagtagcggtg 854
Query: 4338 gcttgtattctagtagtcgccatattattagctgctggtctttattacagacatagaaag 4397
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 855 gcttgtattctagtagtcgccatattattagccgctggactttattacagacatagaaag 914
Query: 4398 aatcttagactaaaggcccaaggaggagttgccttcgaaaacccaagctacctcagagaa 4457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 aatcttagactaaaggcccaaggaggagttgccttcgaaaacccaagctacctcagagaa 974
Query: 4458 ccaaaccctgatagcgttgtcaatggtaacgtacctaacgggattaccaacgacaatatg 4517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 ccaaaccctgatagcgttgtcaatggtaacgtacctaacgggattaccaacgacaatatg 1034
Query: 4518 aacgtcattggcaatggtatatctacgagcacagcatggagacaagagacccagacgcct 4577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 aacgtcattggcaatggtatatctacgagcacagcatggagacaagagacccagacgcct 1094
Query: 4578 ggcagcaccatcccacagcgggaggtggatccttccttatatgaagaactaaaactcggc 4637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 ggcagcaccatcccacagcgggaggtggatccttccttatatgaagaactaaaactcggc 1154
Query: 4638 cacgacggggcgggcttcaagagactgaagtagcccgcagcccgccgctctccgatgcgc 4697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 cacgacggggcgggcttcaagagactgaagtagcccgcagcccgccgctctccgatgcgc 1214
Query: 4698 tcaccgcggctctcgtcgccgcgagtggcgcccgagaactgagcggctgggcccgaaccg 4757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 tcaccgcggctctcgtcgccgcgagtggcgcccgagaactgagcggctgggcccgaaccg 1274
Query: 4758 cggctgatgagccccagggtaccacatattttcatagacttgtacaggttttcgtgcaaa 4817
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1275 cggctgatgagccccagggtaccacatattttcatagacttgtgcaggttttcgtgcaaa 1334
Query: 4818 agctgtggagtgttataataacaccaactttagggtatatcaaaacattcagcatatata 4877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 agctgtggagtgttataataacaccaactttagggtatatcaaaacattcagcatatata 1394
Query: 4878 aaaatataatttaaacaatatatcacgttcagattataagcattttaatattgtatggac 4937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 aaaatataatttaaacaatatatcacgttcagattataagcattttaatattgtatggac 1454
Query: 4938 ccatagcgaccaccaaatatagtcgtaatagacacgtagaaaaatatggaacggttcacc 4997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 ccatagcgaccaccaaatatagtcgtaatagacacgtagaaaaatatggaacggttcacc 1514
Query: 4998 agagtgtagattacaaattattttttcataccttattgtgattctaaccaaatatctgta 5057
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1515 agagtgtagattacaaattattttttcatactttattgtgattctaaccaaatatctgta 1574
Query: 5058 aataaacatttctttgtcaatagttttataatgagaatctttttaggttaaagtagcgac 5117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1575 aataaacatttctttgtcaatagttttataatgagaatctttttaggttaaagtagcgac 1634
Query: 5118 agttttattagaactcaataaaagatgtgccttcgaacaattataaagtagaa 5170
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1635 agttttattagaactcaataaaagatgtgccttcgaacaattataaagtagaa 1687
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 510,406
Number of extensions: 10435
Number of successful extensions: 10435
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10435
Number of HSP's successfully gapped: 1
Length of query: 5170
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5152
Effective length of database: 8,109,745
Effective search space: 41781406240
Effective search space used: 41781406240
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)