BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17017 (UTR included)
(1405 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_976_C1 731 0.0
BF01022A2F11 68 4e-11
>BF14_976_C1
Length = 1729
Score = 731 bits (369), Expect = 0.0
Identities = 375/377 (99%)
Strand = Plus / Plus
Query: 472 ccttgaacttgttttgatttatataaaatatgttgaggcgtttcagtacagtttttctta 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ccttgaacttgttttgatttatataaaatatgttgaggcgtttcagtacagtttttctta 72
Query: 532 cgaaaaaagcaaattatgcaacagcagcagtcccggcaccgaatacaaatcctgaaatat 591
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cgaaaaaagcaaattttgcaacagcagcagtcccggcaccgaatacaaatcctgaaatat 132
Query: 592 tttataccggtctcttcataaacaacgaatgggttaagtcggctgatggcaaaactttca 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tttataccggtctcttcataaacaacgaatgggttaagtcggctgatggcaaaactttca 192
Query: 652 atacagaaaatcctgctaacggcaaagttatcgcagaggtccaacaagctgggaaggcag 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atacagaaaatcctgctaacggcaaagttatcgcagaggtccaacaagctgggaaggcag 252
Query: 712 acgtcgatctagccgtcgccgctgctaaagacgctttcagatttggatcaaaatggcgaa 771
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 acgtcgacctagccgtcgccgctgctaaagacgctttcagatttggatcaaaatggcgaa 312
Query: 772 caatggacgcctcacagcgagggtacctcatcaacaaactcgcggacctcgtcgaaaggg 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 caatggacgcctcacagcgagggtacctcatcaacaaactcgcggacctcgtcgaaaggg 372
Query: 832 acagagcttatcttgct 848
|||||||||||||||||
Sbjct: 373 acagagcttatcttgct 389
>BF01022A2F11
Length = 738
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 922 aaaacacacacacacacacatatatatatatagacatatatatatatata 971
|||||||||||||||||| |||||||| |||| | |||||||||||||||
Sbjct: 353 aaaacacacacacacacatatatatatttatatatatatatatatatata 402
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 233,877
Number of extensions: 13129
Number of successful extensions: 13129
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 13119
Number of HSP's successfully gapped: 2
Length of query: 1405
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1388
Effective length of database: 8,119,229
Effective search space: 11269489852
Effective search space used: 11269489852
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)