BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17020 (UTR included)
(3499 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01035X1F07 842 0.0
>BF01035X1F07
Length = 670
Score = 842 bits (425), Expect = 0.0
Identities = 466/480 (97%), Gaps = 6/480 (1%)
Strand = Plus / Plus
Query: 2532 agattgagagatggttcctgcaaaacaccaaaacctgaagccgaaagaccatgcggtgga 2591
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agattgagagatggttcctgcaaaacacaaaaacctgaagccgaaagaccatgcggtgga 60
Query: 2592 acctgtgcaccgtcttggtatctcagtgactggggggagtgcacaggtccatgtgaggct 2651
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 61 acctgtgcaccgtcttggtatctgagtgactggggggagtgcacaggtccatgtgaggct 120
Query: 2652 ggtattcagactcgtactgtgtggtgtgctcgtggcggggcggggggtgctggtggcgct 2711
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 121 ggtattcagactcgtactgtgtggtgtgctcgtggcggggcggggggtgcgggtggtgct 180
Query: 2712 ggctcagccagagatctggagtgcggcggaggtagaccaccagctaggaggtcctgtgta 2771
||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 ggctcagcccgagatctagagtgcgggggaggtagaccaccagctaggaggtcctgtgta 240
Query: 2772 ccagctaggtgcaccactagaccggtgaagccggccgtgatcacaccc------acagac 2825
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 ccagctaggtgcaccactagaccggtgaagccggccgtgatcacacccacagttacagac 300
Query: 2826 ccgcaacgagtcacgagacatcaaactcagaacacgcagaacgtcaaggaacggtcgtat 2885
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 301 ccgcaacgagtcacgagacatcaaagtcagaacacgcagaacgtcaaggaacggtcgtat 360
Query: 2886 agaaacggaacgtgtaccgacaagttgagcaattgctcgctggcggtgcaagcgcgtctc 2945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaaacggaacgtgtaccgacaagttgagcaattgctcgctggcggtgcaagcgcgtctc 420
Query: 2946 tgtcactaccgctactacgctgatagctgctgtcgctcctgtcacggacggtagacggta 3005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtcactaccgctactacgctgatagctgctgtcgctcctgtcacggacggtagacggta 480
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,169
Number of extensions: 4914
Number of successful extensions: 4914
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4914
Number of HSP's successfully gapped: 2
Length of query: 3499
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3481
Effective length of database: 8,109,745
Effective search space: 28230022345
Effective search space used: 28230022345
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)