BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17021 (UTR included)
(2773 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01008X1A04 1497 0.0
>BF01008X1A04
Length = 797
Score = 1497 bits (755), Expect = 0.0
Identities = 779/787 (98%)
Strand = Plus / Plus
Query: 769 ccgtcagtagtcctggtacatacgaggcagctggtgcaagattcgtttacagcagaaaaa 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ccgtcagtagtcctggtacatacgaggcagctggtgcaagattcgtttacagcagaaaaa 70
Query: 829 caggtctagattcagtgtatgcacttggacctacccacgattctatcgatattatgatat 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 caggtctagattcagtgtatgcacttggacctacccacgattctatcgatattatgatat 130
Query: 889 tatacactcaaccaaatccaagtataaaatacgaatatttcaccgaatcgttgccaggtg 948
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 131 tatacactcaaccaaatccaagtataaaatacgaatatttcactgaatcgttgccaggtg 190
Query: 949 aagttgaaactgaatcattgacagtgtccccaccagaaccaactgtcgtacccaaacatt 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aagttgaaactgaatcattgacagtgtccccaccagaaccaactgtcgtacccaaacatt 250
Query: 1009 cgagacgtcatcacggtatagaatacgctaaagcaggagcccggcatttggatccaggag 1068
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 251 cgagacgtcatcacggtatagaatacgctagagcaggagcccggcatttggatccaggag 310
Query: 1069 tcaaagataaaaacaacgttgaggaaaatgtcgtagctggaagaaaatttgtatggaaga 1128
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 311 tcaaagataaaaacaacgttgaagaaaatgtcgtagctggaagaaaatttgtatggaaga 370
Query: 1129 tacttgcgtatactcagtgttctagaagctgcggtggtggtattcagctaggaaaataca 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tacttgcgtatactcagtgttctagaagctgcggtggtggtattcagctaggaaaataca 430
Query: 1189 ggtgcgtagaagtatcctctagtgattgggaggtgtccccagcacattgtttgggttccc 1248
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 431 ggtgcgtagaagtatcctctagtgatagggaggtgtccccagcacattgtttgggttccc 490
Query: 1249 ctccgtcaggtagacgtcgtcgttgtggaaccattccttgcgctccgagatggcgggccg 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ctccgtcaggtagacgtcgtcgttgtggaaccattccttgcgctccgagatggcgggccg 550
Query: 1309 ctagctggtctccatgcccgtcctgtggaccagcgacaaagaataggatcgttggatgtg 1368
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctagctggtctccgtgcccgtcctgtggaccagcgacaaagaataggatcgttggatgtg 610
Query: 1369 tacaagatcattcaagaggaattactaaggtaagcgatcaaaaatgtttggcttcaaaac 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 611 tacaagatcattcaagaggaattactaaggtaagcgatcaaaaatgtttggctccaaaac 670
Query: 1429 cggcgaccacagaagattgtaacatcccagattgtaaaaaccctggaatacggcacacag 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cggcgaccacagaagattgtaacatcccagattgtaaaaaccctggaatacggcacacag 730
Query: 1489 aggcgaagccccaggaacatacagatgccttccacgatggttcagtgtacacagtcgatg 1548
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 731 aggcgaagccccaagaacatacagatgccttccacgatggttcagtgtacacagttgatg 790
Query: 1549 ttaatac 1555
|||||||
Sbjct: 791 ttaatac 797
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 358,933
Number of extensions: 8052
Number of successful extensions: 8052
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8052
Number of HSP's successfully gapped: 1
Length of query: 2773
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2756
Effective length of database: 8,119,229
Effective search space: 22376595124
Effective search space used: 22376595124
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)