BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17022 (UTR included)
(1729 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2389_C1 1015 0.0
BF14_2389_C2 168 2e-41
BF14_335_C4 84 9e-16
BF01019A1H08 82 3e-15
BF01056B2D01 78 5e-14
BF01017A1F03 74 8e-13
BF01048A1E04 70 1e-11
BF01014B2F02 68 5e-11
>BF14_2389_C1
Length = 858
Score = 1015 bits (512), Expect = 0.0
Identities = 515/516 (99%)
Strand = Plus / Plus
Query: 711 aggatgtcgaccctgctgttttggcagggtaagggaaagaccaacggcgccaacggccga 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggatgtcgaccctgctgttttggcagggtaagggaaagaccaacggcgccaacggccga 260
Query: 771 aactggattcatgccccagacgccctcgtcaaaggacacgtcgcatatctagttaaattc 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactggattcatgccccagacgccctcgtcaaaggacacgtcgcatatctagttaaattc 320
Query: 831 ctcggctgcacacaggtggaccaacccaagggcatcgaggttgtcaaggacgcaattaaa 890
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ctcggctgcacacaggtggaccaacccaagggcatcgaggttgtcaaggacgcgattaaa 380
Query: 891 aagttgcaattcacgcaacaattaaaaaaatccgaaacaaaggatgcggcgaaatgcaag 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagttgcaattcacgcaacaattaaaaaaatccgaaacaaaggatgcggcgaaatgcaag 440
Query: 951 aaagtcgagataaccgtatcagtagacggcgtcgctatacaggagccgagaacaaacaat 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagtcgagataaccgtatcagtagacggcgtcgctatacaggagccgagaacaaacaat 500
Query: 1011 gtgatgtaccagttcccactgcatcggatatcatactgtgctgatgacaaaggagctaag 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgatgtaccagttcccactgcatcggatatcatactgtgctgatgacaaaggagctaag 560
Query: 1071 aagtacttctcatttatagctaaaggtggcagcaccgtcaacggggtcaatggtcacgat 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtacttctcatttatagctaaaggtggcagcaccgtcaacggggtcaatggtcacgat 620
Query: 1131 acaacggagaaacatgaatgttttgtgtttatatcaactaaactggcctcggagataaca 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaacggagaaacatgaatgttttgtgtttatatcaactaaactggcctcggagataaca 680
Query: 1191 ctcactatagggcaggcattcgacttggcttatagg 1226
||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcactatagggcaggcattcgacttggcttatagg 716
Score = 198 bits (100), Expect = 2e-50
Identities = 104/106 (98%)
Strand = Plus / Plus
Query: 1441 aggcggtttttgaacgataatgggaaatacatcgaaatgcaaaaactgaccttacagaac 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 aggcggtttttgaacgataatgggaaatacatcgaaatgcaaaaactgaccttacagaac 773
Query: 1501 aagaagctcgaaatgcaaatgaacgcttacaagaatcgcttacagg 1546
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 774 aagaagctcgaaatgcaaatgaacgcttacaagnntcgcttacagg 819
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1641 caggagttatcaaaaataacgtacaaggatgacctctcgtcct 1683
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 caggagttatcaaaaataacgtacaaggatgacctctcgtcct 858
>BF14_2389_C2
Length = 744
Score = 168 bits (85), Expect = 2e-41
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 1641 caggagttatcaaaaataacgtacaaggatgacctctcgtcctacctcagccgtcacaat 1700
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 83 caggagttatcaaaaataacggacaaggatgacctctcgtcctacctcagccgtcacaat 142
Query: 1701 ctctcggacatcacagagttcaagtgtcc 1729
|||||||||||||||||||||||||||||
Sbjct: 143 ctctcggacatcacagagttcaagtgtcc 171
Score = 163 bits (82), Expect = 1e-39
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 1461 tgggaaatacatcgaaatgcaaaaactgaccttacagaacaagaagctcgaaatgcaaat 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggaaatacatcgaaatgcaaaaactgaccttacagaacaagaagctcgaaatgcaaat 60
Query: 1521 gaacgcttacaagaatcgcttacagg 1546
|||||||||||| |||||||||||||
Sbjct: 61 gaacgcttacaaaaatcgcttacagg 86
>BF14_335_C4
Length = 1491
Score = 83.8 bits (42), Expect = 9e-16
Identities = 86/100 (86%), Gaps = 3/100 (3%)
Strand = Plus / Minus
Query: 617 gacgaaacctctcagcattccatggattcaccgtgcgtgtgccgggtccatagcggtgc- 675
||||||| ||||||||||||||||||||||||||||| ||| ||| |||| ||| |||
Sbjct: 1362 gacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttgca 1303
Query: 676 --agaggagcttcaaaactgcttggggcttgcgacccagg 713
||||||||||||| | ||| |||| |||||||||||||
Sbjct: 1302 ggagaggagcttcaacagtgcctgggacttgcgacccagg 1263
>BF01019A1H08
Length = 504
Score = 81.8 bits (41), Expect = 3e-15
Identities = 84/98 (85%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 620 gaaacctctcagcattccatggattcaccgtgcgtgtgccgggtccatagcggtgc---- 675
||||||||| ||||||| |||||||||||||||| ||||||||||||| ||| |||
Sbjct: 369 gaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttgcaggg 428
Query: 676 agaggagcttcaaaactgcttggggcttgcgacccagg 713
||||||||||||| | ||| |||| ||||||||||||
Sbjct: 429 agaggagcttcaacagtgcctgggagttgcgacccagg 466
>BF01056B2D01
Length = 728
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 617 gacgaaacctctcagcattccatggattcaccgtgcgtgtgccgggtccat 667
|||||||||||||| ||||||||| |||||||||||| |||||||||||||
Sbjct: 78 gacgaaacctctcaacattccatgaattcaccgtgcgggtgccgggtccat 128
>BF01017A1F03
Length = 782
Score = 73.8 bits (37), Expect = 8e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 617 gacgaaacctctcagcattccatggattcaccgtgcgtgtgccgggtcc 665
|||||| |||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 344 gacgaatcctctcagcattccatggatacaccgtgcgggtgccgggtcc 296
>BF01048A1E04
Length = 789
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 617 gacgaaacctctcagcattccatggattcaccgtgcgtgtgccgggtccat 667
|||||||||||| | | |||||||||||||||||||| |||||||||||||
Sbjct: 57 gacgaaacctcttatctttccatggattcaccgtgcgggtgccgggtccat 7
>BF01014B2F02
Length = 623
Score = 67.9 bits (34), Expect = 5e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 617 gacgaaacctctcagcattccatggattcaccgtgcgtgtgccgggtcca 666
|||||||||||||||||||| ||||| ||||||||| ||||||||||||
Sbjct: 521 gacgaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtcca 570
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 265,910
Number of extensions: 16318
Number of successful extensions: 16318
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 16312
Number of HSP's successfully gapped: 11
Length of query: 1729
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1712
Effective length of database: 8,119,229
Effective search space: 13900120048
Effective search space used: 13900120048
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)