BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17075 (UTR included)
(2122 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B1G02 1247 0.0
BF01048A2D11 850 0.0
BF01051A1B07 729 0.0
>BF01051B1G02
Length = 681
Score = 1247 bits (629), Expect = 0.0
Identities = 653/661 (98%), Gaps = 2/661 (0%)
Strand = Plus / Minus
Query: 1029 gataacgagtcagctgataagagcttcccatgtagggtctgcgggaagtggtattcgacc 1088
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 gataacgagtcagctgataagagcttcccatgtagggnnngcgggaagtggtattcgacc 622
Query: 1089 agggtcacgctcaagatccacgcgcgcgttcatcagaacaagggcggcggcggctccagg 1148
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agggtgacgctcaagatccacgcgcgcgttcatcagaacaagggcggcggcggctccagg 562
Query: 1149 tccagggcgcgttcctcggacagatacgagtgtgactgttgcagcgagacgttcagcagg 1208
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccggggcgcgttcctcggacagatacgagtgtgactgttgcagcgagacgttcagcagg 502
Query: 1209 agagagaagctttgggagcataaggctgaagcccaccgcggcgctatgactgtccgatgc 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agagagaagctttgggagcataaggctgaagcccaccgcggcgctatgactgtccgatgc 442
Query: 1269 gaggtttgtcgtcggtgcttcgaggacgacaacgagctggcggcgcacgccaccacacac 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggtttgtcgtcggtgcttcgaggacgacaacgagctggcggcgcacgccaccacacac 382
Query: 1329 actagtgatgacaggataggtcgttgctcggactgcggctcgtcgttcgccagatacgac 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actagtgatgacaggataggtcgttgctcggactgcggctcgtcgttcgccagatacgac 322
Query: 1389 cagctgcgccgccaccgcgcctccgtccacggctcggcgcccgcccgcctgccgcacgcg 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagctgcgccgccaccgcgcctccgtccacggctcggcgcccgcccgcctgccgcacgcg 262
Query: 1449 tgcgtccagtgcggcaagagattctcacacgcgcactccctcaccagacacgcgcacaac 1508
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcgtccagtgcggcaagagattttcacacgcgcactccctcaccagacacgcgcacaac 202
Query: 1509 cacgccaagcaactgtacagatgcgtggtttgtaaggcatccttcgcccgcgcggaccaa 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacgccaagcaactgtacagatgcgtggtttgtaaggcatccttcgcccgcgcggaccaa 142
Query: 1569 ctcgcccagcacctgaacagccacctcgccacctacaaacgtatgaagcagtgagcgcgc 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ctcgcccagcacctgaacagccacctcgccacctacaaacgtatgaagcagtgagcgcgc 82
Query: 1629 acaatatacatatatatacatatatatatata--tataattttaatatagagttttattt 1686
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 81 acaatatacatatatatacatatatatatatatatataattttaatatagagttttattt 22
Query: 1687 a 1687
|
Sbjct: 21 a 21
>BF01048A2D11
Length = 809
Score = 850 bits (429), Expect = 0.0
Identities = 445/450 (98%), Gaps = 4/450 (0%)
Strand = Plus / Plus
Query: 1232 ggctgaagcccaccgcggcgctatgactgtccgatgcgaggtttgtcgtcggtgcttcga 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggctgaagcccaccgcggcgctatgactgtccgatgcgaggtttgtcgtcggtgcttcga 423
Query: 1292 ggacgacaacgagctggcggcgcacgccaccacacacactagtgatgacaggataggtcg 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggacgacaacgagctggcggcgcacgccaccacacacactagtgatgacaggataggtcg 483
Query: 1352 ttgctcggactgcggctcgtcgttcgccagatacgaccagctgcgccgccaccgcgcctc 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttgctcggactgcggctcgtcgttcgccagatacgaccagctgcgccgccaccgcgcctc 543
Query: 1412 cgtccacggctcggcgcccgcccgcctgccgcacgcgtgcgtccagtgcggcaagagatt 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cgtccacggctcggcgcccgcccgcctgccgcacgcgtgcgtccagtgcggcaagagatt 603
Query: 1472 ctcacacgcgcactccctcaccagacacgcgcacaaccacgccaagcaactgtacagatg 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ctcacacgcgcactccctcaccagacacgcgcacaaccacgccaagcaactgtacagatg 663
Query: 1532 cgtggtttgtaaggcatccttcgcccgcgcggaccaactcgcccagcacctgaacagcca 1591
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cgtggtttgtaaggcatctttcgcccgcgcggaccaactcgcccagcacctgaacagcca 723
Query: 1592 cctcgccacctacaaacgtatgaagcagtgagcgcgcacaatatacatatatatacatat 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cctcgccacctacaaacgtatgaagcagtgagcgcgcacaatatacatatatatac---- 779
Query: 1652 atatatatatataattttaatatagagttt 1681
||||||||||||||||||||||||||||||
Sbjct: 780 atatatatatataattttaatatagagttt 809
Score = 498 bits (251), Expect = e-140
Identities = 266/272 (97%)
Strand = Plus / Plus
Query: 960 ccggagtcggattcggatccggagcgcggggccccggtcgctcggaccgatgacgacatc 1019
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ccggagtcggattcggatccggagcgcgnnntcccggtcgctcggaccgatgacgacatc 60
Query: 1020 agcgaatcggataacgagtcagctgataagagcttcccatgtagggtctgcgggaagtgg 1079
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 agcgaatcggataacgagtcagctgataagagtttcccatgtagggtctgcgggaagtgg 120
Query: 1080 tattcgaccagggtcacgctcaagatccacgcgcgcgttcatcagaacaagggcggcggc 1139
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattcgaccagggtgacgctcaagatccacgcgcgcgttcatcagaacaagggcggcggc 180
Query: 1140 ggctccaggtccagggcgcgttcctcggacagatacgagtgtgactgttgcagcgagacg 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggctccaggtccagggcgcgttcctcggacagatacgagtgtgactgttgcagcgagacg 240
Query: 1200 ttcagcaggagagagaagctttgggagcataa 1231
||||||||||||||||||||||||||||||||
Sbjct: 241 ttcagcaggagagagaagctttgggagcataa 272
>BF01051A1B07
Length = 704
Score = 729 bits (368), Expect = 0.0
Identities = 378/382 (98%)
Strand = Plus / Plus
Query: 478 aaattcgggtccgcaataacttgatgccttcgaacgagcccatcaccctcgacagtgacg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaattcgggtccgcaataacttgatgccttcgaacgagcccatcaccctcgacagtgacg 382
Query: 538 acgaaccagatttgggttccccgagtcaggcttcggattccctgagtatggatgaaaatt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acgaaccagatttgggttccccgagtcaggcttcggattccctgagtatggatgaaaatt 442
Query: 598 taagagcgttgcgtcacatacacgagaaatacgcgaatatacataaggacgacctgtacg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 taagagcgttgcgtcacatacacgagaaatacgcgaatatacataaggacgacctgtacg 502
Query: 658 aagcccatctccttgctgcgaatttcaaacaaccagatgcgaggggtgacgacgacgtgc 717
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 503 aagcccatctccttgctgcgaatttcaaacaaccagatgcgaggggtgacgatgacgtgc 562
Query: 718 tctcagtagctagctccgatggtagcgcgtcagtaaaagaattaggtacaagagtagaaa 777
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 563 tctcagtagctagctccgatggtagctcgtcagtaaaagaattaggtacaagagtagaaa 622
Query: 778 aattggaggatagttcgaattccgagtcaggcagtagcagttcggagtcagatagtagta 837
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 623 aattggaggatagttcgaattccgagtcaggcagtagcagttcggnntcagatagtagta 682
Query: 838 gttcatcgtcgtctagctcgtc 859
||||||||||||||||||||||
Sbjct: 683 gttcatcgtcgtctagctcgtc 704
Score = 307 bits (155), Expect = 4e-83
Identities = 195/206 (94%), Gaps = 3/206 (1%)
Strand = Plus / Plus
Query: 1 aacaacagataataaatagctattcagattatataaaaaaatatataattaccatcctat 60
||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||
Sbjct: 48 aacaacagataataaatagctattcagattatatataaaagaatataattatcatcctat 107
Query: 61 ata--tatagcaaacaatttatttataaataatttaaatatacatgtgtacggttagatt 118
||| ||||||||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 108 atacatatagcaaacaatttatttataaatgatttaaatatatatatgtacggttagatt 167
Query: 119 cggccgcatcctcatcagctggcgaatcaacgcctcgtgttaagcgcaagtacactaaaa 178
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 168 cggccgcatcctcatcagctggcgagtcaacgcctcgtgttaagcgcaagtacact-aaa 226
Query: 179 gagcacccggcaccaagaaggaatca 204
||||||||||||||||||||||||||
Sbjct: 227 gagcacccggcaccaagaaggaatca 252
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 265,840
Number of extensions: 12283
Number of successful extensions: 12283
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 12266
Number of HSP's successfully gapped: 5
Length of query: 2122
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2105
Effective length of database: 8,119,229
Effective search space: 17090977045
Effective search space used: 17090977045
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)