BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17080 (UTR included)
(1304 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 165 2e-40
BF01037B1H08 119 1e-26
BF01010B2F09 111 3e-24
BF01043B1E03 101 3e-21
BF01037A2H12 92 3e-18
BF01031B2E06 88 4e-17
BF14_335_C4 88 4e-17
BF01055B2A04 82 3e-15
BF01023A2A12 76 2e-13
BF01056B2D01 68 4e-11
BF01056B1D02 68 4e-11
>BF14_335_C2
Length = 1827
Score = 165 bits (83), Expect = 2e-40
Identities = 273/337 (81%), Gaps = 22/337 (6%)
Strand = Plus / Minus
Query: 565 acatatttttatattcgcgaattttaaagcgcgttgttctgatagagcccacggttcctt 624
|||||||| | |||||||||||||||||||||| | || |||||||| ||||||||||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 625 gggaaaccaacatccccaaagaccatgccatcaaggtcaacaagtattacgagctcacta 684
|| | ||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctc---- 1162
Query: 685 acgaacttactaagaatatgttcggtgt-aaatttgtacgcgggagaaat------aaga 737
|||| ||||| ||||| | ||||||||||| || |||| | |||
Sbjct: 1161 --------actaggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagt 1110
Query: 738 gcgagaggtataacagccaaatctctctacaacctgctaaaagacttaggccggccacga 797
| ||||||||||||||| ||||||||||||| ||| |||||| |||| |||| | | ||
Sbjct: 1109 gagagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccaga 1050
Query: 798 actaacatcagttcattcgtggaacgtgcgccgaaggcagccctagcaggttcgtttcaa 857
||||||| |||||||||| | |||||| | ||||| |||| |||| |||||||||||||
Sbjct: 1049 actaacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaa 990
Query: 858 atttgcttaggtagagagaggagcttggacagtggag 894
||||| |||| ||||||||||||||||| ||||||
Sbjct: 989 atttggttag---gagagaggagcttggacggtggag 956
>BF01037B1H08
Length = 758
Score = 119 bits (60), Expect = 1e-26
Identities = 107/123 (86%), Gaps = 6/123 (4%)
Strand = Plus / Minus
Query: 333 aatactcttagaaagtacatatga------aaagatcacattggtacttgtaaggtttcg 386
|||| ||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 184 aatattcttagaaagtacatatgactcggaaaagatcacattggtacttgccaggtttcg 125
Query: 387 aacccgcgccctcacgtgtgagaggcgggcctttaaccttcaggctacctcgacttttgt 446
|||||||||| |||||| ||||||||||||||||||||| ||||| || |||||||| |
Sbjct: 124 aacccgcgccttcacgtatgagaggcgggcctttaacctccaggccacaacgacttttat 65
Query: 447 gaa 449
|||
Sbjct: 64 gaa 62
>BF01010B2F09
Length = 764
Score = 111 bits (56), Expect = 3e-24
Identities = 88/99 (88%), Gaps = 6/99 (6%)
Strand = Plus / Plus
Query: 333 aatactcttagaaagtacatatgaa------aagatcacattggtacttgtaaggtttcg 386
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 437 aatactcttagaaagtacatatgactcgatgaagatcacattggtacttgtcaggtttcg 496
Query: 387 aacccgcgccctcacgtgtgagaggcgggcctttaacct 425
|||||||| | ||||||||||||||| ||||||||||||
Sbjct: 497 aacccgcgacttcacgtgtgagaggctggcctttaacct 535
>BF01043B1E03
Length = 830
Score = 101 bits (51), Expect = 3e-21
Identities = 128/153 (83%), Gaps = 3/153 (1%)
Strand = Plus / Plus
Query: 742 gaggtataacagccaaatctctctacaacctgctaaaagacttaggccggccacgaacta 801
||||||||||||| ||||||||||||||| || ||| |||| ||| ||| ||||||
Sbjct: 213 gaggtataacagcttcatctctctacaacctactgaaacacttgagcctgcccagaacta 272
Query: 802 acatcagttcattcgtggaacgtgcgccgaaggcagccctagcaggttcgtttcaaattt 861
|||||| |||||| |||||||| | | ||||||| ||||| ||| |||||||||||
Sbjct: 273 acatcaaatcattcttggaacgtactgcaaaggcaggcctag---gtttgtttcaaattt 329
Query: 862 gcttaggtagagagaggagcttggacagtggag 894
| |||||||||||||||| ||||||||||||||
Sbjct: 330 ggttaggtagagagaggaccttggacagtggag 362
>BF01037A2H12
Length = 773
Score = 91.7 bits (46), Expect = 3e-18
Identities = 89/102 (87%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 714 aatttgtacgcgggagaaataagagcgagaggtataacagccaaatctctctacaacctg 773
|||||||||| || | || || ||||||||||||||| ||||||||||||| ||||||||
Sbjct: 671 aatttgtacgaggtaaaagtaggagcgagaggtataaaagccaaatctctcgacaacctg 730
Query: 774 ctaaaagacttaggccggccacgaactaacatcagttcattc 815
||||||||||| | | |||| || |||||||||||||||||
Sbjct: 731 ctaaaagactt-gccttgccaagagctaacatcagttcattc 771
>BF01031B2E06
Length = 707
Score = 87.7 bits (44), Expect = 4e-17
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 627 gaaaccaacatccccaaagaccatgccatcaaggtcaacaagtattacg-agctcactaa 685
||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
>BF14_335_C4
Length = 1491
Score = 87.7 bits (44), Expect = 4e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 811 cattcgtggaacgtgcgccgaaggcagccctagcaggttcgtttcaaatttgcttaggta 870
||||| ||||||||| | | ||||||||||||||||| ||| |||| ||||| |||||||
Sbjct: 1135 cattcttggaacgtgagtctaaggcagccctagcaggatcgattcatatttggttaggta 1194
Query: 871 gagagaggagcttgga 886
||||||||||||||||
Sbjct: 1195 gagagaggagcttgga 1210
>BF01055B2A04
Length = 830
Score = 81.8 bits (41), Expect = 3e-15
Identities = 100/119 (84%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 584 aattttaaagcgcgttgttctgatagagcccacggttccttgggaaaccaacatccccaa 643
|||||| |||| ||||||| | ||||||| ||| |||| ||| ||||||||||||||||
Sbjct: 563 aatttttaagctcgttgttttaatagagcttacgattccctggaaaaccaacatccccaa 504
Query: 644 agaccatgccatcaaggtcaacaagtattacgagctcactaacgaacttactaagaata 702
||||| ||||| | ||||||| ||| ||| |||||||||||||||| |||| |||||
Sbjct: 503 agaccgtgccaccgaggtcaataag---tacaagctcactaacgaactcactaggaata 448
>BF01023A2A12
Length = 723
Score = 75.8 bits (38), Expect = 2e-13
Identities = 79/89 (88%), Gaps = 4/89 (4%)
Strand = Plus / Minus
Query: 355 gaaaagatcacattggtacttgtaaggtttcgaacccgcgccctcacgtgtgagaggcgg 414
|||||||||||||||||||||| ||||||| |||||||||||||||||| | |||||
Sbjct: 135 gaaaagatcacattggtacttgccaggtttc-aacccgcgccctcacgtg--atgggcgg 79
Query: 415 gcctttaaccttcaggctacctcgacttt 443
|||||||||||||||| ||| |||||||
Sbjct: 78 -cctttaaccttcaggccaccacgacttt 51
>BF01056B2D01
Length = 728
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 847 gttcgtttcaaatttgcttaggtagagagaggagcttggacagtgg 892
|||||||||||||||| |||||||||||||||| ||||||| ||||
Sbjct: 258 gttcgtttcaaatttgattaggtagagagaggaacttggaccgtgg 213
>BF01056B1D02
Length = 778
Score = 67.9 bits (34), Expect = 4e-11
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 355 gaaaagatcacattggtacttgtaaggtttcgaacccgcgccctcacgtg 404
|||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 540 gaaaagatcacattggtacttgccaggtttc-aacccgcgccctcacgtg 492
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 170,250
Number of extensions: 4380
Number of successful extensions: 4380
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 4373
Number of HSP's successfully gapped: 12
Length of query: 1304
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1287
Effective length of database: 8,119,229
Effective search space: 10449447723
Effective search space used: 10449447723
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)