BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17101 (UTR included)
(2191 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B1A12 1405 0.0
BF01023B2B05 938 0.0
BF14_556_C1 157 9e-38
>BF01031B1A12
Length = 735
Score = 1405 bits (709), Expect = 0.0
Identities = 728/735 (99%)
Strand = Plus / Plus
Query: 350 gttgtagtattcgtctttgtttacgtgtcgaaatcaacgaacgaatagttcttttatact 409
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gttgtagtattcgtctttgtttacgtgtcgaanncaacgaacgaatagttcttttatact 60
Query: 410 tagtgtgtgtcgctgcagtatatggaattgttgggaagatatattcgtgtcaaaattgtt 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagtgtgtgtcgctgcagtatatggaattgttgggaagatatattcgtgtcaaaattgtt 120
Query: 470 aaaagaactataatcgtgcatatcatttgaaatgaacaacggggacgtcggaggctctag 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaagaactataatcgtgcatatcatttgaaatgaacaacggggacgtcggaggctctag 180
Query: 530 aggcagaggccgtggttggaattccgacaaccaacctcgcgaattacgccggcccaaaac 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggcagaggccgtggttggaattccgacaaccaacctcgcgaattacgccggcccaaaac 240
Query: 590 tgtaactgaggaagtgaaagaacctccaaagtcaatactgtcagctgaagcgaaagaatg 649
||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 241 tgttactgaggaagtgaaagaacctccaaagtcaatactctcagctgaagcgaaggaatg 300
Query: 650 gtatccgcggaactacgtgccccagaaccaagtgtcgtatgggcaggagcactaccgagt 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtatccgcggaactacgtgccccagaaccaagtgtcgtatgggcaggagcactaccgagt 360
Query: 710 gcctcgctattccgctcaagatagaatccgacaggctcaggaacaggatccgtacaactt 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcctcgctattccgctcaagatagaatccgacaggctcaggaacaggatccgtacaactt 420
Query: 770 tgaggatatgtcatattctttggatgaacccgaaagtgccttacgggaaaatatagcaaa 829
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 421 tgaggatatgtcatattctttagatgaacccgaaagtgccttgcgggaaaatatagcaaa 480
Query: 830 cctgattactgttatgtgtgagataacatttgacccaggcaagtttgacactctctgtgg 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctgattactgttatgtgtgagataacatttgacccaggcaagtttgacactctctgtgg 540
Query: 890 acctctggtagattcattttatgccactctacatgatgctaactacaccaggcctcttgt 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acctctggtagattcattttatgccactctacatgatgctaactacaccaggcctcttgt 600
Query: 950 cgaagctatcgtgaatcagtcaatattcgaggccaacttccgctacaatggcgcccgtct 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgaagctatcgtgaatcagtcaatattcgaggccaacttccgctacaatggcgcccgtct 660
Query: 1010 ttgctcgatgtacgactccgtctcgcctcccgaagactcaacattccgagcctgtctgtt 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgctcgatgtacgactccgtctcgcctcccgaagactcaacattccgagcctgtctgtt 720
Query: 1070 ggaacgttgtactgc 1084
|||||||||||||||
Sbjct: 721 ggaacgttgtactgc 735
>BF01023B2B05
Length = 786
Score = 938 bits (473), Expect = 0.0
Identities = 505/513 (98%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 1680 atcaaacgatagtaacagtttgagaaccactaccgctacataaactgcagaattgactcg 1739
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaaaccatagtaacagtttgagaaccactaccgctacataaactgcagaattgactcg 60
Query: 1740 atctaacatgtactacctaagtccatagttttgtaatgtggaattttatcctatgttgta 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctaacatgtactacctaagtccatagttttgtaatgtggaattttatcctatgttgta 120
Query: 1800 atatgaatattgactgcgccccgatattaacacatgctccaacttaatgcaataatcgct 1859
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 atatgaatattgactgcgccccgatattaacacatgctccatcttaatgcaataatcgct 180
Query: 1860 tgtatgaaatgaaagataaaaaataaaaaataaaattaaaaattaatatctagattttcc 1919
|||||||||||||||| ||||||| ||||||||||| ||||| | |||||||||||||||
Sbjct: 181 tgtatgaaatgaaagaaaaaaaat-aaaaataaaataaaaaaattatatctagattttcc 239
Query: 1920 cgttagctaagtgtaagatctagttcaataattttatagctcgaataatgtacatcagta 1979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cgttagctaagtgtaagatctagttcaataattttatagctcgaataatgtacatcagta 299
Query: 1980 tcatatatatatatatacacatatatatta-ttttttttcaagtacatattggtctgcgg 2038
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 300 tcatatatatatatatacacatatatattatttttttttcaagtacatattggtctgcgg 359
Query: 2039 atgttttattttgtgggatgtgactagcatttaaacaatatatttttaatatttttaatt 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atgttttattttgtgggatgtgactagcatttaaacaatatatttttaatatttttaatt 419
Query: 2099 gatcatgcgtatgatgcacgtgttattgacttaatgtaaacaagtaactaactggtgtat 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gatcatgcgtatgatgcacgtgttattgacttaatgtaaacaagtaactaactggtgtat 479
Query: 2159 gcagtacttaccatgagtttgaaaaacgtttgc 2191
|||||||||||||||||||||||||||||||||
Sbjct: 480 gcagtacttaccatgagtttgaaaaacgtttgc 512
>BF14_556_C1
Length = 2892
Score = 157 bits (79), Expect = 9e-38
Identities = 155/181 (85%), Gaps = 7/181 (3%)
Strand = Plus / Minus
Query: 1 gaaaaaacacctgttaattttctgtcactgaggttggtattgattgcacgcatctcgctt 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 1886 gaaaaaacacctgttaattttctgtcactgaggttggtatcgattgcacgcatcatgcga 1827
Query: 61 aaggagtatttttaagttttaagagtgctaaattgtgcgaattgttgctgtagttgaaac 120
||| |||| |||| || ||||||| |||||||||| |||||||||||||| ||
Sbjct: 1826 aagcagtacttttgag-------agtgctagattgtgcgaaacgttgctgtagttgagac 1774
Query: 121 attcaccgttgagcataatgccgcataatgtgctctggtgctgtaattgcaaaactacca 180
||||| |||| | ||| ||||||||||||| ||||||||||||| |||| ||||||||||
Sbjct: 1773 attcaacgttaaacattatgccgcataatgcgctctggtgctgttattggaaaactacca 1714
Query: 181 a 181
|
Sbjct: 1713 a 1713
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 263,456
Number of extensions: 11139
Number of successful extensions: 11139
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 11134
Number of HSP's successfully gapped: 4
Length of query: 2191
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2174
Effective length of database: 8,119,229
Effective search space: 17651203846
Effective search space used: 17651203846
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)