BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17110 (UTR included)
(3190 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B2C06 1431 0.0
>BF01026B2C06
Length = 778
Score = 1431 bits (722), Expect = 0.0
Identities = 763/778 (98%)
Strand = Plus / Plus
Query: 1137 agaggttatgcgaaacttcttggtaaagtttgtggggaagccttccctcgtacatatacc 1196
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaggttatgcgaagcttcttggtaaagtttgtggggaagccttccctcgtacatatacc 60
Query: 1197 acaactggacctcatgcttggctgaagtttcactctgatgataccattgaatatgagggt 1256
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 acaactggacctcatgcttggctgaagtttcactctgacgataccattgaatatgagggt 120
Query: 1257 ttccgcattgatattaagttcatacgtactccaaccagttacagcataccagattcctgt 1316
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 121 ttccgcattgacattaagttcatacgtactccaaccagttatagcataccagattcatgt 180
Query: 1317 tacaaggaactaccgaaaggtagcaggcatgcgatcatagtatcaaatgatattgataag 1376
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 tacaaggaactaccgaaaggtagcaggcatgcaatcatagtatcaaatgatattgataag 240
Query: 1377 gactgtagcgctagaacagttgaccaggatctagattttttatggaatttcacagcacct 1436
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 241 gactgtagcgctagaacagttgaccaggatctagattttctatggaatttcacagcacct 300
Query: 1437 cttggtcacaagatttatctgaatttcacacagtatacgttggcaaaacccaatgagtgt 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttggtcacaagatttatctgaatttcacacagtatacgttggcaaaacccaatgagtgt 360
Query: 1497 gagcacaattttgttgaaatctttggacatgtattggaatcagacgccagacttgttttg 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagcacaattttgttgaaatctttggacatgtattggaatcagacgccagacttgttttg 420
Query: 1557 tactgcggttctgttgcaaaccctgtaacatcgaaaggtattgaaggtattaaagatggt 1616
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 421 tactgcggttctgttgcaaaccctgtaacctcgaaaggtattgaaggtattaaagatggt 480
Query: 1617 gatgacaaaggaaacataatgtttgtacgattgtacacgtcaaaagtaggaaaatcatcc 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gatgacaaaggaaacataatgtttgtacgattgtacacgtcaaaagtaggaaaatcatcc 540
Query: 1677 ttttttaatgccagcttcatagcttacagaactttggacactacgaaggatggagataaa 1736
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 541 ttttttaatgccagcttcatagcttacagaactttggacactaccaaggatggagataaa 600
Query: 1737 tgtgacgaagagactgaattcgactgtgaagataatacatgtatcgataaaagtttaaaa 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtgacgaagagactgaattcgactgtgaagataatacatgtatcgataaaagtttaaaa 660
Query: 1797 tgtgacaatactgcccagtgcaggttaaaagctgacgaagaaaaagatagatgctcaagt 1856
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgtgacaatactgcccagtgcagattaaaagctgacgaagaaaaagatagatgctcaagt 720
Query: 1857 ccagccgattccatgattgatcaaactcacatcaaagtgattctcatcattttctgtc 1914
||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 721 ccagcngnnnccatgattgatcaaactcatatcaaagtgattctcatcattttctgtc 778
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 405,962
Number of extensions: 12324
Number of successful extensions: 12324
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12324
Number of HSP's successfully gapped: 1
Length of query: 3190
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3172
Effective length of database: 8,109,745
Effective search space: 25724111140
Effective search space used: 25724111140
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)