BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17114 (UTR included)
(2026 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A2G08 654 0.0
BF14_2890_C1 472 e-132
BF01021A2F10 94 1e-18
BF01025A1H05 86 3e-16
BF01038A2H08 84 1e-15
BF14_1341_C1 80 2e-14
BF14_433_C1 72 4e-12
BF01044B2C02 70 2e-11
BF01010B2F01 70 2e-11
>BF01040A2G08
Length = 705
Score = 654 bits (330), Expect = 0.0
Identities = 356/364 (97%), Gaps = 3/364 (0%)
Strand = Plus / Minus
Query: 1620 atataacatgcgcgtcccgtgcgagcgctgcgcacggctcggggcgcggtgctgcatcca 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 atataacatgcgcgtcccgtgcgagcgctgcgcacggctcggggcgcggtgctgcatcca 646
Query: 1680 ctcgtcgagttatgaagtaggaactgaacaatgggctcgtgatccggcc---agcgacgg 1736
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 645 ctcgtcgagttatgaagtaggaactgaacaacgggctcgtgatccggcccgcagcgacgg 586
Query: 1737 gcgcggtggacacgaggagcgactcctcgccggcagccgctggcatcacgagagcggctt 1796
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ccgcggcggacacgaggagcgcctcctcgccggcagccgctggcatcacgagagcggctt 526
Query: 1797 actgagcgagtcgaagtacttcaggatgtcgtggcggccgtgcgctgcggcggcctgcgc 1856
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 525 actgagcgagtcgaagtacttcaggatgtcgtggcggccgtgcgcggcggcggcctgcgc 466
Query: 1857 cggggtgagcccggccgcgttacggagccggagggcggctgtgacgtcacagccggtcaa 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cggggtgagcccggccgcgttacggagccggagggcggctgtgacgtcacagccggtcaa 406
Query: 1917 caacagccgcgcgcaggacacgtggccgaacatggccgcgccgtggagggcggactggcc 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 caacagccgcgcgcaggacacgtggccgaacatggccgcgccgtggagggcggactggcc 346
Query: 1977 gttc 1980
||||
Sbjct: 345 gttc 342
>BF14_2890_C1
Length = 1206
Score = 472 bits (238), Expect = e-132
Identities = 249/253 (98%)
Strand = Plus / Minus
Query: 1728 cagcgacgggcgcggtggacacgaggagcgactcctcgccggcagccgctggcatcacga 1787
||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 1206 cagcgacggccgcggcggacacgaggagcgantcctcgccagcagccgctggcatcacga 1147
Query: 1788 gagcggcttactgagcgagtcgaagtacttcaggatgtcgtggcggccgtgcgctgcggc 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 gagcggcttactgagcgagtcgaagtacttcaggatgtcgtggcggccgtgcgctgcggc 1087
Query: 1848 ggcctgcgccggggtgagcccggccgcgttacggagccggagggcggctgtgacgtcaca 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 ggcctgcgccggggtgagcccggccgcgttacggagccggagggcggctgtgacgtcaca 1027
Query: 1908 gccggtcaacaacagccgcgcgcaggacacgtggccgaacatggccgcgccgtggagggc 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 gccggtcaacaacagccgcgcgcaggacacgtggccgaacatggccgcgccgtggagggc 967
Query: 1968 ggactggccgttc 1980
|||||||||||||
Sbjct: 966 ggactggccgttc 954
>BF01021A2F10
Length = 792
Score = 93.7 bits (47), Expect = 1e-18
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 217 tcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaa 263
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaa 47
>BF01025A1H05
Length = 756
Score = 85.7 bits (43), Expect = 3e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 217 tcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaa 263
|||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 292 tcaaaaggactcgtatccagagccctaaaaacatttacaaaaaaaaa 246
>BF01038A2H08
Length = 781
Score = 83.8 bits (42), Expect = 1e-15
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 217 tcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaaaa 262
||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 524 tcaaaaggactcgtatccagagccgtaaaaatatttacaaaaaaaa 479
>BF14_1341_C1
Length = 1009
Score = 79.8 bits (40), Expect = 2e-14
Identities = 47/48 (97%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 217 tcaaaaggactcgtatccagagccgt-aaaaacatttacaaaaaaaaa 263
|||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 947 tcaaaaggactcgtatccagagccgtaaaaaacatttacaaaaaaaaa 994
>BF14_433_C1
Length = 2144
Score = 71.9 bits (36), Expect = 4e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 220 aaaggactcgtatccagagccgtaaaaacatttacaaaaaaaaa 263
||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 1626 aaaggactcgtatccagagccgtaataacatttgcaaaaaaaaa 1583
>BF01044B2C02
Length = 774
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 220 aaaggactcgtatccagagccgtaaaaacatttacaaaaaaaa 262
|||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 102 aaagtactcgtatccagagccgtaaaagcatttacaaaaaaaa 144
>BF01010B2F01
Length = 839
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 220 aaaggactcgtatccagagccgtaaaaacatttacaaaaaaaa 262
||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 553 aaaggactcgtattcagagccgtaaaaacatttacaataaaaa 511
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 225,522
Number of extensions: 4764
Number of successful extensions: 4764
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 4762
Number of HSP's successfully gapped: 9
Length of query: 2026
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2009
Effective length of database: 8,119,229
Effective search space: 16311531061
Effective search space used: 16311531061
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)