BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17130 (UTR included)
(2632 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B2F09 176 1e-43
BF01023A2A12 131 6e-30
BF01056B1D02 115 4e-25
BF01037B1H08 96 3e-19
BF01062A1A05 78 8e-14
BF01031B1E12 70 2e-11
>BF01010B2F09
Length = 764
Score = 176 bits (89), Expect = 1e-43
Identities = 204/242 (84%), Gaps = 14/242 (5%)
Strand = Plus / Plus
Query: 2399 catcatcaccagtctatcagagcccaccgctgaaaggcctcttctcacattgagaaggtt 2458
|||||||||||| || || |||||| ||||||| |||| ||||||||||| |||||||||
Sbjct: 264 catcatcaccagcctgtcggagcccgccgctgagaggcgtcttctcacatggagaaggtt 323
Query: 2459 agagcattaatcaccaagctcgctcaaagcgggttggcgcgatttcatttttataatttg 2518
|||||||||||||||| |||||||||| ||| ||| ||||||| | |||||||||||
Sbjct: 324 agagcattaatcaccacgctcgctcaagacggattg--gcgattttaattttataattt- 380
Query: 2519 aaattacaaatccaggtttcctcatattttccttcaccgtctgtcagtggtgtct----- 2573
|||||||||||||||||||||||||| |||||||||||| |||||||| ||||
Sbjct: 381 ttattacaaatccaggtttcctcatattctccttcaccgtccgtcagtggcgtctaaata 440
Query: 2574 ------gaaagtacatatgactcggaaaagatcacattggtgctcgccaggtttcgaacc 2627
|||||||||||||||||| |||||||||||||| || | |||||||||||||
Sbjct: 441 ctcttagaaagtacatatgactcgatgaagatcacattggtacttgtcaggtttcgaacc 500
Query: 2628 cg 2629
||
Sbjct: 501 cg 502
>BF01023A2A12
Length = 723
Score = 131 bits (66), Expect = 6e-30
Identities = 202/247 (81%), Gaps = 19/247 (7%)
Strand = Plus / Minus
Query: 2393 tatcaccatcatcaccagtctatcagagcccaccgctga---aaggcctcttctcacatt 2449
||||| |||||||| ||| ||||| |||| ||| ||||| |||||||||| ||||||
Sbjct: 349 tatcatcatcatcatcagcctatcggagctcactgctgagcaaaggcctcttatcacatg 290
Query: 2450 gagaaggttagagcattaatcaccaagctcgctcaaagcgggttggcgcgatttcatttt 2509
||||||||||||||||||||||||| |||||||||| || | ||| | ||||||| |
Sbjct: 289 gagaaggttagagcattaatcaccacgctcgctcaaggctgattg--gtgatttcaaact 232
Query: 2510 tataatttgaaattacaaatccaggtttcctc---atattttccttcaccgtctgtcagt 2566
||||||||||||||| || |||||||||||| | || |||||||||||| ||||||
Sbjct: 231 tataatttgaaattataagaccaggtttcctcacgacgttctccttcaccgtccgtcagt 172
Query: 2567 ggtgtct-----------gaaagtacatatgactcggaaaagatcacattggtgctcgcc 2615
||||||| |||||||||| |||||||||||||||||||||||| || |||
Sbjct: 171 ggtgtctaaatactgttagaaagtacatgtgactcggaaaagatcacattggtacttgcc 112
Query: 2616 aggtttc 2622
|||||||
Sbjct: 111 aggtttc 105
>BF01056B1D02
Length = 778
Score = 115 bits (58), Expect = 4e-25
Identities = 200/246 (81%), Gaps = 26/246 (10%)
Strand = Plus / Minus
Query: 2394 atcaccatcatcaccagtctatcagagcccaccgctga---aaggcctcttctcacattg 2450
|||| ||| |||| ||| ||||| |||||||| ||||| |||||||||||||||||
Sbjct: 746 atcatcattatcatcagcctatcggagcccactgctgagcaaaggcctcttctcacat-- 689
Query: 2451 agaaggttagagcattaatcaccaagctcgctcaaagcgggttggcgcgatttcattttt 2510
||||||||||||||||| ||||| ||| |||||| |||||||||| |||||| | ||
Sbjct: 688 -gaaggttagagcattaaccaccacgcttgctcaagacgggttggcg--atttcaatctt 632
Query: 2511 ataatttgaaattacaaatccaggtttcctc---atattttccttcaccgtctgtcagtg 2567
|||||||||||||| || |||||||||||| | |||||||||||| |||||||
Sbjct: 631 ataatttgaaattataagaccaggtttcctcacgacgttttccttcacc----gtcagtg 576
Query: 2568 gtgtct-----------gaaagtacatatgactcggaaaagatcacattggtgctcgcca 2616
|||||| ||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 575 gtgtctaactacccttagaaagtacatatgactcggaaaagatcacattggtacttgcca 516
Query: 2617 ggtttc 2622
||||||
Sbjct: 515 ggtttc 510
>BF01037B1H08
Length = 758
Score = 95.6 bits (48), Expect = 3e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 2574 gaaagtacatatgactcggaaaagatcacattggtgctcgccaggtttcgaacccg 2629
||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 174 gaaagtacatatgactcggaaaagatcacattggtacttgccaggtttcgaacccg 119
Score = 71.9 bits (36), Expect = 5e-12
Identities = 77/90 (85%), Gaps = 3/90 (3%)
Strand = Plus / Minus
Query: 2399 catcatcaccagtctatcagagcccaccgctga---aaggcctcttctcacattgagaag 2455
||||| || ||| ||||| |||||||| ||||| ||||||||||||||||| |||||
Sbjct: 347 catcaccatcagcctatcggagcccacagctgagcaaaggcctcttctcacatgtagaag 288
Query: 2456 gttagagcattaatcaccaagctcgctcaa 2485
||||||||||||| ||||| ||| ||||||
Sbjct: 287 gttagagcattaagcaccacgcttgctcaa 258
>BF01062A1A05
Length = 777
Score = 77.8 bits (39), Expect = 8e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 2431 aaaggcctcttctcacattgagaaggttagagcattaatcaccaagctcgctcaa 2485
||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct: 569 aaaggcctcttctcacaaggagaaggttagagcattaatcaccacgcttgctcaa 515
>BF01031B1E12
Length = 730
Score = 69.9 bits (35), Expect = 2e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 2439 cttctcacattgagaaggttagagcattaatcaccaagctcgctcaaagcgggttggcg 2497
||||||||| ||||||||||||||||||||||||| ||| |||||| ||||||||||
Sbjct: 174 cttctcacacggagaaggttagagcattaatcaccacgcttgctcaagacgggttggcg 116
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,190
Number of extensions: 3378
Number of successful extensions: 3378
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 3374
Number of HSP's successfully gapped: 9
Length of query: 2632
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2615
Effective length of database: 8,119,229
Effective search space: 21231783835
Effective search space used: 21231783835
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)