BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17132 (UTR included)
(3118 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A2E05 1289 0.0
BF01011A1H06 80 2e-14
>BF01020A2E05
Length = 676
Score = 1289 bits (650), Expect = 0.0
Identities = 669/676 (98%)
Strand = Plus / Plus
Query: 1052 gaagccgtggttctatggacagttcgacgccgtagtgctgccatctgtcatgtttatgtt 1111
||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gaagccgtggttctacgggcagttcgacgccgtnntgctgccatctgtcatgtttatgtt 60
Query: 1112 ggatcaggctggactacctttccaccagcgtggtgatccaatcaagatgagccgcgttct 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggatcaggctggactacctttccaccagcgtggtgatccaatcaagatgagccgcgttct 120
Query: 1172 ctctcgtatcgtgaactctaatgatgacgacggggttctggtgggtcgttgggatggtga 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctctcgtatcgtgaactctaatgatgacgacggggttctggtgggtcgttgggatggtga 180
Query: 1232 atacgaggacggcaccgcgccagcagactggacaggctccgtggacatccttgcccagta 1291
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 181 atacgaggacggcaccgcgccagcagactggacgggctccgtggacatccttgcccagta 240
Query: 1292 tctggagacgcaggcgccggtcatgtacgggcagtgctgggtcttcgcgggagtcgtcac 1351
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctggagacgcaggcgccggtcatgtacgggcagtgctgggtcttcgcgggagtcgtcac 300
Query: 1352 taccgtgtgccgagcgctagggttgccgtccagggttgtctctaacctggtgtctgctca 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taccgtgtgccgagcgctagggttgccgtccagggttgtctctaacctggtgtctgctca 360
Query: 1412 cgacgcgaacagctcgctcacagtggacaagtactacacagagaccatggaagagctgga 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgacgcgaacagctcgctcacagtggacaagtactacacagagaccatggaagagctgga 420
Query: 1472 catagaccccaacaaccctcaaggagccgactccatctggaattaccacgtctggaacga 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catagaccccaacaaccctcaaggagccgactccatctggaattaccacgtctggaacga 480
Query: 1532 cgtctggatggcacgacctgatctcccaccaggttacggaggttggcaagcaatcgatgc 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgtctggatggcacgacctgatctcccaccaggttacggaggttggcaagcaatcgatgc 540
Query: 1592 tactccccaagaaacctctcaaggcatgtatcaatgcggcccggcgccgctagaggctat 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tactccccaagaaacctctcaaggcatgtatcaatgcggcccggcgccgctagaggctat 600
Query: 1652 taagcaaggagtcataggcatcagctacgacgtcgagttcatgttagcttcagtgaacgc 1711
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taagcaaggtgtcataggcatcagctacgacgtcgagttcatgttagcttcagtgaacgc 660
Query: 1712 ggacctcatgaggtgg 1727
||||||||||||||||
Sbjct: 661 ggacctcatgaggtgg 676
>BF01011A1H06
Length = 739
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 384 ctacatactcctgacgtttcggttcctttacagtttccgtgatcacgagcagacgagatg 443
||||||||||| |||||||||||| |||| |||| ||||||||||| ||||||||||||
Sbjct: 517 ctacatactcccgacgtttcggttacttttcagtaaccgtgatcacgggcagacgagatg 458
Query: 444 aaagtgtcagtcagtt 459
|||||| |||||||
Sbjct: 457 tgagtgtctgtcagtt 442
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 402,769
Number of extensions: 10228
Number of successful extensions: 10228
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10228
Number of HSP's successfully gapped: 2
Length of query: 3118
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3100
Effective length of database: 8,109,745
Effective search space: 25140209500
Effective search space used: 25140209500
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)