BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17134 (UTR included)
(2125 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052B1C08 1511 0.0
>BF01052B1C08
Length = 773
Score = 1511 bits (762), Expect = 0.0
Identities = 768/770 (99%)
Strand = Plus / Plus
Query: 1012 cgacccccctggacatgtcctggccgtctggtttccggaagcgagtgacgtacttgttgg 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgacccccctggacatgtcctggccgtctggtttccggaagcgagtgacgtacttgttgg 60
Query: 1072 tcgcacctattgtcttcccactttggattactctcccggacacaaggactccgagaggga 1131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgcacctattgtcttcccactttggattactctcccggacacaaggactccgagaggga 120
Query: 1132 agaaattgtttcctataacatttataggatcaattgtttggatagcgtttttttcctacc 1191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaaattgtttcctataacatttataggatcaattgtttggatagcgtttttttcctacc 180
Query: 1192 tcatggtgtggtgggctaatttggtgggagcgacggcgtacgttcccccggaggtgatgg 1251
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 181 tcatggtgtggtgggctaatttggtgggggcgacggcgtacgttcccccggaggtgatgg 240
Query: 1252 ggctcacgctgcttgccgcagggacctcggtgccggacttaataacgtcggtgatagtcg 1311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggctcacgctgcttgccgcagggacctcggtgccggacttaataacgtcggtgatagtcg 300
Query: 1312 cgaggaaaggtttcggtgacatggccgtgtcgagctccgtgggcagcaacatatttgatg 1371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgaggaaaggtttcggtgacatggccgtgtcgagctccgtgggcagcaacatatttgatg 360
Query: 1372 tcacagtcggtctgccgctgccgtggctgctgtacggcatcatcaacggcgagccggtgc 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcacagtcggtctgccgctgccgtggctgctgtacggcatcatcaacggcgagccggtgc 420
Query: 1432 aggtcaattctaagggtatggtgtgcagtattgtgctgcttttcgcgatgctgatcttcg 1491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggtcaattctaagggtatggtgtgcagtattgtgctgcttttcgcgatgctgatcttcg 480
Query: 1492 tcatcatcagcatagcctgcttcagatggaagatgaacagaggtctcggtttcaccatgt 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcatcatcagcatagcctgcttcagatggaagatgaacagaggtctcggtttcaccatgt 540
Query: 1552 ttctgctatacttcgtgttcgttgccgtcagtttaggtctagagtacggatatttgcatt 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttctgctatacttcgtgttcgttgccgtcagtttaggtctagagtacggatatttgcatt 600
Query: 1612 gtcccagcgaatagtgcttagagacattagtttaaagtcacgagcacaaatcggttcaaa 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcccagcgaatagtgcttagagacattagtttaaagtcacgagcacaaatcggttcaaa 660
Query: 1672 caacaatacatcgatgttacgatatatgtaattaagatcggttatttaatttcaatatta 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caacaatacatcgatgttacgatatatgtaattaagatcggttatttaatttcaatatta 720
Query: 1732 tagcatgaatatttctatatatttttattggttcacaattttaaaaaaaa 1781
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 721 tagcatgaatatttctatatatttttattggttcacaatttaaaaaaaaa 770
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 272,370
Number of extensions: 6619
Number of successful extensions: 6619
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6619
Number of HSP's successfully gapped: 1
Length of query: 2125
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2108
Effective length of database: 8,119,229
Effective search space: 17115334732
Effective search space used: 17115334732
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)