BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17165 (UTR included)
(988 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B2B01 329 5e-90
>BF01031B2B01
Length = 791
Score = 329 bits (166), Expect = 5e-90
Identities = 235/257 (91%), Gaps = 2/257 (0%)
Strand = Plus / Plus
Query: 1 actccagatgtgtgttctgctttctttgatggtgaggtatttgccttattctacctgcaa 60
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 537 actcccgatgtgtgttctgctttctttgatggtgaggtatttgccttattctgcctgaaa 596
Query: 61 ttttgactaaaaccccttttgagattttcttgaaacttaatcccattatgcttattatta 120
||||||||||||| |||||||||||||| |||||||||||||||||| || | |||||
Sbjct: 597 ttttgactaaaactccttttgagattttattgaaacttaatcccattgtgttatttattt 656
Query: 121 taattttgttttatgacacgaacctctaaatgtattggggttaaagcggggggacatgag 180
||||||||||| |||||| || ||||||||||||||||||||||||| || ||||||||
Sbjct: 657 taattttgttt--tgacacaaatctctaaatgtattggggttaaagcgaggagacatgag 714
Query: 181 ttccttgttatgatgtgagcgtttgtcttgaagtgtatcggacacgctgcataagaggtt 240
|| ||||||| ||||||||||||||||||| |||||||||||||||||| || |||||||
Sbjct: 715 tttcttgttacgatgtgagcgtttgtcttggagtgtatcggacacgctgtattagaggtt 774
Query: 241 atatctctgggtctggg 257
| |||||||||||||||
Sbjct: 775 agatctctgggtctggg 791
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 105,852
Number of extensions: 2163
Number of successful extensions: 2163
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2162
Number of HSP's successfully gapped: 1
Length of query: 988
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 971
Effective length of database: 8,119,229
Effective search space: 7883771359
Effective search space used: 7883771359
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)