BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17166 (UTR included)
(2338 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B1H07 418 e-116
BF01026B1E07 208 3e-53
>BF01058B1H07
Length = 835
Score = 418 bits (211), Expect = e-116
Identities = 214/215 (99%)
Strand = Plus / Plus
Query: 1576 gaggcagtattgactttaaaaacagacttctggtcagatggttcagattattcccgatgt 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggcagtattgactttaaaaacagacttctggtcagatggttcagattattcccgatgt 60
Query: 1636 tcctgagccttatgctgttctgcacgtacatccttcctgacatcaacaacggtcctcagt 1695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctgagccttatgctgttctgcacgtacatccttcctgacatcaacaacggtcctcagt 120
Query: 1696 ggaaccttgtggtggaggaacatagccgtgtctgcgaaaaaaacatgtggaagagcttcc 1755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggaaccttgtggtggaggaacatagccgtgtctgcgaaaaaaacatgtggaagagcttcc 180
Query: 1756 tcttcatacacaactacttcggctttgaggatatg 1790
||||||||||||||||||||||||| |||||||||
Sbjct: 181 tcttcatacacaactacttcggcttcgaggatatg 215
>BF01026B1E07
Length = 585
Score = 208 bits (105), Expect = 3e-53
Identities = 108/109 (99%)
Strand = Plus / Minus
Query: 1459 aggtatttggtatgccttgggcagtgatcgggcggtctgccattgtctacactgacagct 1518
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 155 aggtatttggtatgccttgggcagtgatcgggcggtctgccattgtctacaccgacagct 96
Query: 1519 tcctttatctcagtggcttcctcaacgctcacaacttgatgcaggaact 1567
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tcctttatctcagtggcttcctcaacgctcacaacttgatgcaggaact 47
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,885
Number of extensions: 5710
Number of successful extensions: 5710
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5710
Number of HSP's successfully gapped: 2
Length of query: 2338
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2321
Effective length of database: 8,119,229
Effective search space: 18844730509
Effective search space used: 18844730509
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)