BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17169 (UTR included)
(1378 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A1E06 1356 0.0
>BF01040A1E06
Length = 729
Score = 1356 bits (684), Expect = 0.0
Identities = 712/720 (98%), Gaps = 1/720 (0%)
Strand = Plus / Plus
Query: 348 tatcgtaatttgaacaccgtaagtgtgagttctgtgacattaaatataatcaaaatgttt 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tatcgtaatttgaacaccgtaagtgtgagttctgtgacattaaatataatcaaaatgttt 70
Query: 408 tatagaaatataataaaaactataggaacaagaacttctaagttatgtaaatataacggt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tatagaaatataataaaaactataggaacaagaacttctaagttatgtaaatataacggt 130
Query: 468 atttgtaatatattcggcaattataacagcattatgccgttatcaacaacaagattggcg 527
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 131 atttgtaatatattcggcaattataaaagcattatgccgttatcaacaacaagattggcg 190
Query: 528 ctaaaggatgaaaaggtgaaggtagttttcaatttgtatgacggccgtcgcctggagacc 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ctaaaggatgaaaaggtgaaggtagttttcaatttgtatgacggccgtcgcctggagacc 250
Query: 588 gaaggtaaggttggtgacacactgctggacgtggtggtcaataacgacctggacattgac 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gaaggtaaggttggtgacacactgctggacgtggtggtcaataacgacctggacattgac 310
Query: 648 gggtacggagcttgtgagggtactctgacatgttccacctgtcacgtggtgctcaaacag 707
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 311 gggtacggagcttgtgagggtactctgacatgttccacttgtcacgtggtgctcaaacag 370
Query: 708 cccgactatgacaggttaccagaagaagcaggtgatgaggaacgcgacatgttagacctg 767
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 371 cccgactatgacaggttaccagaagaagcgggtgatgaggaacgcgacatgttagacctg 430
Query: 768 gcgtacggtttgacggatacgtctaggttagggtgtcagattacattgaccaaagacctg 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gcgtacggtttgacggatacgtctaggttagggtgtcagattacattgaccaaagacctg 490
Query: 828 gacggcctggaagtagatgtacccgaaagcgtcaacgacgccaggagttgacaggcaatt 887
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 491 gacggcctggaagtagatgtacctgaaagcgtcaacgacgccaggagttgacaggcaatt 550
Query: 888 ataaaacgggtctgcatctggaaactgaacagatatgagaccaggattttgacctggtac 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ataaaacgggtctgcatctggaaactgaacagatatgagaccaggattttgacctggtac 610
Query: 948 acctggaactttaatctaagcataactcacgataaatttgatttttaaataataataact 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 acctggaactttaatctaagcataactcacgataaatttgatttttaaataataataact 670
Query: 1008 atatgaagtaaggtccacttttcattcattactttaaattggtaacatgaattaaaaact 1067
| |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 671 acatgaagtaagatccacttttcattcattac-ttaaattgataacatgaattaaaaact 729
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 285,832
Number of extensions: 25399
Number of successful extensions: 25399
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 25397
Number of HSP's successfully gapped: 1
Length of query: 1378
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1361
Effective length of database: 8,119,229
Effective search space: 11050270669
Effective search space used: 11050270669
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)