BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17174 (UTR included)
(1471 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2147_C1 1400 0.0
>BF14_2147_C1
Length = 804
Score = 1400 bits (706), Expect = 0.0
Identities = 783/806 (97%), Gaps = 7/806 (0%)
Strand = Plus / Plus
Query: 347 atacgtcaaaacaatggttaaaactaacataagtaataagatttaaatcattttacggtg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atacgtcaaaacaatggttaaaactaacataagtaataagatttaaatcattttacggtg 61
Query: 407 aagtaatatttgattcacaaattgattctcgcatttaatcttcatttaatacacaattt- 465
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 62 aagtaatatttgattcacaaattgattctcgcatttaatcttcatttaacacacaattta 121
Query: 466 tgtataacagttattagcttagataataggtaaaaatgtcggagaggctaaaaaccagca 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgtataacagttattagcttagataataggtaaaaatgtcggagaggctaaaaaccagca 181
Query: 526 atatttcaaatgaagaagtcatcgaagatttaactaaagatctagaaatgtctctaaaaa 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atatttcaaatgaagaagtcatcgaagatttaactaaagatctagaaatgtctctaaaaa 241
Query: 586 ccggcgaaggtgattttgttgtgaaaccagacgcctctggagatgaaaagacttcatggt 645
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccggcgaaggtgattttgttgtgaaaccagacgcctctggagatgaaaagacttcatcca 301
Query: 646 ttctatttagttcatttctag---ttccatcagcaagtaatactttcaatgacgagacgg 702
| || ||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 302 a---agataaatcaagtaaagatgttccatcagcaagtaatactttcaatgacgagacgg 358
Query: 703 agatagacagtaaatatgaagatagcgacaaagaaagcgattcagactcaatagatgaga 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agatagacagtaaatatgaagatagcgacaaagaaagcgattcagactcaatagatgaga 418
Query: 763 catctctcaaagatgctgaaatgaatctgacagaagatgagaaagctgaacggcaggtga 822
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 419 catctctcaaagatgctgaaatgaatctaacagaagacgagaaagctgaacggcaggtga 478
Query: 823 tcgccgaggagttgaagagggcaggcaacgaagcattcaaggtcggagactttgatagga 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tcgccgaggagttgaagagggcaggcaacgaagcattcaaggtcggagactttgatagga 538
Query: 883 gcatagagaaatatactgaagccctccgtatatgtcccctacaatacacaacacagcgtg 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gcatagagaaatatactgaagccctccgtatatgtcccctacaatacacaacacagcgtg 598
Query: 943 ccatactgtactgcaacaggagcgcctcaaagatgaagttggagaggtacaagcaggcga 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ccatactgtactgcaacaggagcgcctcaaagatgaagttggagaggtacaagcaggcga 658
Query: 1003 tcaaagactgcaccagggccgtggagctcgacgatacataccttaaggcctattacaggc 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tcaaagactgcaccagggccgtggagctcgacgatacataccttaaggcctattacaggc 718
Query: 1063 gagctcagtcctacgaggccacagacaagctggacgagtgtctggctgactacaagaaga 1122
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 719 gagctcagtcctacgaggccacagacaagctggacgagtgtctggctgattacaagaaga 778
Query: 1123 ttctagaactcgacccgtcgcacaag 1148
||||||||||||||||||||||||||
Sbjct: 779 ttctagaactcgacccgtcgcacaag 804
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,393
Number of extensions: 6234
Number of successful extensions: 6234
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6233
Number of HSP's successfully gapped: 2
Length of query: 1471
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1454
Effective length of database: 8,119,229
Effective search space: 11805358966
Effective search space used: 11805358966
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)