BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17206 (UTR included)
(1828 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A2B07 1213 0.0
BF14_593_C1 329 9e-90
>BF01005A2B07
Length = 662
Score = 1213 bits (612), Expect = 0.0
Identities = 648/660 (98%)
Strand = Plus / Plus
Query: 303 gttatgaattttccgaataatatttaaaaataattattaaccctaattccgttgttacaa 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gttatgaattttccgaataatatttaaaaataattattaaccctaattccgttgttacac 62
Query: 363 tacctaaccataaaaaatccgccaagtaatattatcataattaaaacggtgaaggatcct 422
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 63 tacctaaccataaaaaatccgccaagtaatattatcataatttaaacggtgaaggatccc 122
Query: 423 tttcgttgaacttttatgttattttatatcatcaacaatcaatgcatttataaagataac 482
| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 123 tctcgttaaacttttatgttatttcatatcatcaacaatcaatgaatttataaagataac 182
Query: 483 atagtatttaaaggtataatggagaataggtacaaatgcgtcaattgtggcgccgcagcc 542
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atagtatttaaaggtgtaatggagaataggtacaaatgcgtcaattgtggcgccgcagcc 242
Query: 543 ggcgctttgtatcgaacgtatggaccttctgtattgaaacttacaaagtgtgacacttgt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggcgctttgtatcgaacgtatggaccttctgtattgaaacttacaaagtgtgacacttgt 302
Query: 603 aaaggattagtggacaaatatatagaatatgactcggtcatagtcatgattgacctggtt 662
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 303 aaaggattagtggacaaatatatagaatatgactcagtcatagtcatgattgacctggtg 362
Query: 663 ctgatgtccaaagcagcacagagacatatcatttacaatacagattttaagatatattgg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctgatgtccaaagcagcacagagacatatcatttacaatacagattttaagatatattgg 422
Query: 723 aagctgttcatcatcctcatgatgttggagacttatggagtgtggaagaacgacagcctt 782
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 423 aagctgttcatcatcctcatgatgttggagacttatggagtgtggaagaatgacagcctt 482
Query: 783 tttaacatcgtggtcaccacagtgtgtgacattagaaataaatatacacttaatacaacc 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tttaacatcgtggtcaccacagtgtgtgacattagaaataaatatacacttaatacaacc 542
Query: 843 cacattagcctaccgatagatttcagtttacctgaatcataccaaagcaaatgtcgaggg 902
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cacattagcctaccaatagatttcagtttacctgaatcataccaaagcaaatgtcgaggg 602
Query: 903 tgggagatcgaagacagagatgctgtagacctcttcatatgggagaagaacttttatata 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tgggagatcgaagacagagatgctgtagacctcttcatatgggagaagaacttttatata 662
>BF14_593_C1
Length = 1318
Score = 329 bits (166), Expect = 9e-90
Identities = 182/186 (97%), Gaps = 1/186 (0%)
Strand = Plus / Minus
Query: 1643 gctatacaaagaataataaatagtacatgcaaaaataaattataccaacatatatgctat 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1318 gctatacaaagaataataaatagtacatgcaaaaataaattataccaacatatatgctat 1259
Query: 1703 atacaggtaagagcattgttgtgatattgatgacgtaaatcatcactacttacatataac 1762
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1258 atacaggcaagagcattgttgtgatattgatgacgtacatcatcactacttacatgtaac 1199
Query: 1763 aatacttataaattaaaatacccttcacatgctctcatgatctttacacattaacttgat 1822
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1198 aatacttataaattaaaatacccttcacatgctctcatgatctttacaca-taacttgat 1140
Query: 1823 ggcata 1828
||||||
Sbjct: 1139 ggcata 1134
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,547
Number of extensions: 6256
Number of successful extensions: 6256
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6255
Number of HSP's successfully gapped: 2
Length of query: 1828
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1811
Effective length of database: 8,119,229
Effective search space: 14703923719
Effective search space used: 14703923719
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)