BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17214 (UTR included)
(1174 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1961_C1 521 e-148
>BF14_1961_C1
Length = 939
Score = 521 bits (263), Expect = e-148
Identities = 278/283 (98%)
Strand = Plus / Plus
Query: 73 agctgctcctcctcagagggtatgccttcaatcactcggctgacttcgagacggtgcgca 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 agctgctcctcctcagagggtatgccttcaatcactcggctgacttcgagacggtgcgca 716
Query: 133 tgatgaaggagaaactatgttacataggatacaacgtggaacaggagcagagactggctt 192
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgatgaaggagaaattatgttacataggatacaacgtggaacaggagcagagactggctt 776
Query: 193 gggagactactgtactcgttgaaccatatgtgttaccagacgggagggtcatcaaagtgg 252
||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 777 gggagaccactgtactcgttgaaccatacgtgttaccagacgggagagtcatcaaagtgg 836
Query: 253 ggggagaacggtttgaagcacccgaggccctgttccagccgcacctcatcaatgtcgagg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ggggagaacggtttgaagcacccgaggccctgttccagccgcacctcatcaatgtcgagg 896
Query: 313 gtcaagggatcgctgagcttgtcttcaacactatacaggcggc 355
|||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 897 gtcaagggatcgctgaacttgtcttcaacactatacaggcggc 939
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 128,394
Number of extensions: 2601
Number of successful extensions: 2601
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2601
Number of HSP's successfully gapped: 1
Length of query: 1174
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1157
Effective length of database: 8,119,229
Effective search space: 9393947953
Effective search space used: 9393947953
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)