BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17218 (UTR included)
(1462 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032A2G08 1090 0.0
>BF01032A2G08
Length = 598
Score = 1090 bits (550), Expect = 0.0
Identities = 568/574 (98%)
Strand = Plus / Plus
Query: 443 ttaagtcaactcaactcacgtttggtcacataacctatcaacaaagaaagactgcaaaat 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaagtcaactcaactcacgtttggtcacataacctatcaacaaagaaagactgcaaaat 60
Query: 503 ggctgaaccacgcgaaagaactttcatcatggttaaaccagacggcgtacaaagaggact 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggctgaaccacgcgaaagaactttcatcatggttaaaccagacggcgtacaaagaggact 120
Query: 563 cgtcggccaaattatggaaaggttcgaaaaaaaaggttttaagcttgtaggtcttaagtt 622
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 cgttggccaaattatggaaaggttcgaaaagaaaggttttaagcttgtaggtcttaagtt 180
Query: 623 tgtgtggccatctgaagagcttttacaaaagcattacagcgacctggcatcgcgaccatt 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtgtggccatctgaagagcttttacaaaagcattacagcgacctggcatcgcgaccatt 240
Query: 683 cttccctggtcttgtgaaatacatgagttccgggcctgttgtacccatggtttgggaagg 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttccctggtcttgtgaaatacatgagttccgggcctgttgtacccatggtttgggaagg 300
Query: 743 acttaacgtagtgaagaccggtcgtcaaatgctcggcgcaacaaacccagctgactcttt 802
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 301 acttaacgtagtgaagaccggtcgtcaaatgctcggcgcaacaaacccagcagactcttt 360
Query: 803 acctggtaccattcgtggagatctgtgcattgaagttggccgcaacattattcacggctc 862
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 acctggtaccattcgtggagatctgtgcattgaagttggccgcaatattattcacggctc 420
Query: 863 tgacagtgttgactcagctaacaaggaaatcaatctctggttcactgaaaaagaactcgt 922
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 421 tgacagtgttgactcagctaacaaggaaatcaatctctggttcactgaaaaggaactcgt 480
Query: 923 cggatggacccctgctgccgagaaatgggtctatgaataaattctttccaatattaatta 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggatggacccctgctgccgagaaatgggtctatgaataaattctttccaatattaatta 540
Query: 983 agtatttccagtgatcaaataaatcaaacaacaa 1016
||||| ||||||||||||||||||||||||||||
Sbjct: 541 agtatctccagtgatcaaataaatcaaacaacaa 574
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,673
Number of extensions: 5294
Number of successful extensions: 5294
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5294
Number of HSP's successfully gapped: 1
Length of query: 1462
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1445
Effective length of database: 8,119,229
Effective search space: 11732285905
Effective search space used: 11732285905
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)