BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17221 (UTR included)
(1444 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B1D08 1516 0.0
>BF01021B1D08
Length = 792
Score = 1516 bits (765), Expect = 0.0
Identities = 777/781 (99%)
Strand = Plus / Plus
Query: 468 ttatttcatcacacttaaataatctctctaactatgtctgattgggatacagtgactatt 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ttatttcatcacacttaaataatctctctaactatgtctgattgggatacagtgactatt 71
Query: 528 cttcgaaagaagccaccaaaggcatcggcactaaagacagaacaagccgttaatgctgca 587
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 cttcgaaagaaaccaccaaaggcatcggcactaaagacagaacaagccgttaatgctgca 131
Query: 588 cgtcgtcaaggtttaccagtagacactcaacaaaaatacggtgcggggactaataaacaa 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 cgtcgtcaaggtttaccagtagacactcaacaaaaatacggtgcggggactaataaacaa 191
Query: 648 catgttacaacaaaaaatactgcaaaactcgatagagaaacagaagaacttagacatgaa 707
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 192 catgttacaacaaaaaatactgcaaaactcgatagagaaacagaagagcttagacatgaa 251
Query: 708 aaagtacccctcgatttaggaaagcttataatgcaaggacgacaagctaaaggcatgagt 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaagtacccctcgatttaggaaagcttataatgcaaggacgacaagctaaaggcatgagt 311
Query: 768 caaaaagatttggccacaaaaatatgtgaaaaaccacaaatcgtaaatgactatgaggcc 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 caaaaagatttggccacaaaaatatgtgaaaaaccacaaatcgtaaatgactatgaggcc 371
Query: 828 ggtcgtggtatacctaacaacatcgttcttggtaaaatagagagggcaattggaataaaa 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggtcgtggtatacctaacaacatcgttcttggtaaaatagagagggcaattggaataaaa 431
Query: 888 ctaagaggaaaagatcgcggccaaccgctacagcctcctggtggaaaaaaagtatagcgg 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ctaagaggaaaagatcgcggccaaccgctacagcctcctggtggaaaaaaagtatagcgg 491
Query: 948 atcccctaggaggcgaagatttctccgattactttattgcataatatttctcatttttgc 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atcccctaggaggcgaagatttctccgattactttattgcataatatttctcatttttgc 551
Query: 1008 tgttaaaggtatttttcttatataaaaatacagttaaatattcgatataatggtgaaaaa 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgttaaaggtatttttcttatataaaaatacagttaaatattcgatataatggtgaaaaa 611
Query: 1068 tgtaagcatttatttctactgtgtaggtcatgtctggaatgttctctaatgtgatgttac 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgtaagcatttatttctactgtgtaggtcatgtctggaatgttctctaatgtgatgttac 671
Query: 1128 catcgcgaaaatgtttacaaatttcagcgattgtgaaacatggatgtgatatgcaataaa 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 catcgcgaaaatgtttacaaatttcagcgattgtgaaacatggatgtgatatgcaataaa 731
Query: 1188 aatagttttatttataatttgttttgtttctaattcaattacatcgaaactatgttgtat 1247
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 732 aatagttttatttataatttgttttgtttttaattcatttacatcgaaactatgttgtat 791
Query: 1248 g 1248
|
Sbjct: 792 g 792
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,783
Number of extensions: 8402
Number of successful extensions: 8402
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8402
Number of HSP's successfully gapped: 1
Length of query: 1444
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1427
Effective length of database: 8,119,229
Effective search space: 11586139783
Effective search space used: 11586139783
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)