BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17222 (UTR included)
(1456 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A1C12 1273 0.0
BF01021B1D08 264 4e-70
>BF01043A1C12
Length = 698
Score = 1273 bits (642), Expect = 0.0
Identities = 685/698 (98%), Gaps = 1/698 (0%)
Strand = Plus / Plus
Query: 421 acttgtttgtcgtgaagttttcacaataaatatattttctaaatatataagttaatgtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 acttgtttgtcgtgaagttttcacaataaatatattttctaaatatataagttaatgtta 61
Query: 481 attgtacaataaaacttaaaatggacaatgaaacacaatctgaaacggaggaagaaattt 540
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 attatacaataaatcttaaaatggacaatgaaacacaatctgaaacggaggaagaaattt 121
Query: 541 tggtttatgctgaatttgaagacagtgtgaacctcaataaatataaatttgttcatgttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tggtttatgctgaatttgaagacagtgtgaacctcaataaatataaatttgttcatgttt 181
Query: 601 tagggatagacacaaaacatccagtttttcaattagatgatacattttttacaggtacat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tagggatagacacaaaacatccagtttttcaattagatgatacattttttacaggtacat 241
Query: 661 atgaaaatccactgggtacttatatgttttttgaagaagatcccactattcaaagttcag 720
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 242 atgaaaatccactgggtacttatatgttttttgaagaagaccccactattcaaagttcag 301
Query: 721 atccattgtttgatagattgccagccaaaaatttaaaatatttatgcaagacaaggaaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atccattgtttgatagattgccagccaaaaatttaaaatatttatgcaagacaaggaaac 361
Query: 781 ttataaatgtagaacatgcttatgttacaccaaaggaggaagataaaggacaaggccaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttataaatgtagaacatgcttatgttacaccaaaggaggaagataaaggacaaggccaaa 421
Query: 841 gtgaagtagtgaatgacgacacacagaatgaggatatacaaccagctgcctttaactcta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtgaagtagtgaatgacgacacacagaatgaggatatacaaccagctgcctttaactcta 481
Query: 901 ttcaagaagcgctagagatattcaaaaaagagtgggagaacaagataaaagaataatata 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttcaagaagcgctagagatattcaaaaaagagtgggagaacaagataaaagaataatata 541
Query: 961 aaacaaaatgtctgtctttaatatcccaaaagaaaccagtatatatcgtatctagaaaat 1020
||||||||||||||||||||||||||||||||||| || |||| || || |||||||| |
Sbjct: 542 aaacaaaatgtctgtctttaatatcccaaaagaaatcattatacat-gtgtctagaaagt 600
Query: 1021 cttttgtcactttatttattgagtgttaatagctacaaaatactgcaatattaacattaa 1080
||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||
Sbjct: 601 cttttgtcactttatttattgagtgttaatagcaacaaaaatctgaaatattaacattaa 660
Query: 1081 tattgtgtcaataacattcatttttaatcaattgatga 1118
||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tattgtgtcaataacattcatttttaatcaattgatga 698
>BF01021B1D08
Length = 792
Score = 264 bits (133), Expect = 4e-70
Identities = 139/141 (98%)
Strand = Plus / Plus
Query: 1 gttctctaatgtgatgttaccatcgcgaaaatgtttacaaatttcagcgattgtgaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gttctctaatgtgatgttaccatcgcgaaaatgtttacaaatttcagcgattgtgaaaca 711
Query: 61 tggatgtgatatgcaataaaaatagttttatttataatttgttttgtttctaattcaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 712 tggatgtgatatgcaataaaaatagttttatttataatttgttttgtttttaattcattt 771
Query: 121 acatcgaaactatgttgtatg 141
|||||||||||||||||||||
Sbjct: 772 acatcgaaactatgttgtatg 792
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 281,033
Number of extensions: 7981
Number of successful extensions: 7981
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7980
Number of HSP's successfully gapped: 2
Length of query: 1456
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1439
Effective length of database: 8,119,229
Effective search space: 11683570531
Effective search space used: 11683570531
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)