BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17229 (UTR included)
(3847 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A1H07 957 0.0
>BF01043A1H07
Length = 746
Score = 957 bits (483), Expect = 0.0
Identities = 501/507 (98%)
Strand = Plus / Plus
Query: 1706 ggagaagtcgtctagagtgacttcaagagaggagagtaaatggaccccgcagcctccgct 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggagaagtcgtctagagtgacttcaagagaggagagtaaatggaccccgcagcctccgct 299
Query: 1766 gatgactttgttcaaaactcaccagacctcaaccatcaaacagatacagaccaaaaagga 1825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gatgactttgttcaaaactcaccagacctcaaccatcaaacagatacagaccaaaaagga 359
Query: 1826 aaagcaatgggaagatcatatgtcggaggtgggcaggggcgtcagtatgtataggactac 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aaagcaatgggaagatcatatgtcggaggtgggcaggggcgtcagtatgtataggactac 419
Query: 1886 agaaggcagcgaattagtagtgaacggtataccagaatccctgagaggagaactttggag 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agaaggcagcgaattagtagtgaacggtataccagaatccctgagaggagaactttggag 479
Query: 1946 cgtgttctcagggtctatcctacagaaggcccaaaacaagggcctgtacgagaagttagt 2005
||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 480 cgtgttctcagggtctatcctacagaaggcccaaaacaaaggcctatatgagaagttagt 539
Query: 2006 gaatgaggccttgtcgtcaaagaatcaagcgaatgatgagatcgagagagacttgcacag 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gaatgaggccttgtcgtcaaagaatcaagcgaatgatgagatcgagagagacttgcacag 599
Query: 2066 atcactaccggaacatccggcatttcaaaataatgttggtatatctgcattgcgtcgcgt 2125
|||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 atcactgccagaacacccggcatttcaaaataatgttggtatatctgcattgcgtcgcgt 659
Query: 2126 gttatgcgcttacgcactaaagaaccccacgatcggctactgtcaggcgatgaatattgt 2185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gttatgcgcttacgcactaaagaaccccacgatcggctactgtcaggcgatgaatattgt 719
Query: 2186 tgcctccgtactcctgatatactgccc 2212
|||||||||||||||||||||||||||
Sbjct: 720 tgcctccgtactcctgatatactgccc 746
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 402,918
Number of extensions: 7410
Number of successful extensions: 7410
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7410
Number of HSP's successfully gapped: 1
Length of query: 3847
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3829
Effective length of database: 8,109,745
Effective search space: 31052213605
Effective search space used: 31052213605
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)