BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17236 (UTR included)
(1843 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1976_C1 1487 0.0
>BF14_1976_C1
Length = 778
Score = 1487 bits (750), Expect = 0.0
Identities = 762/766 (99%)
Strand = Plus / Plus
Query: 488 gagtagtcgcaaaatgagatggttattgctgttacctgtactaatcgctacaacttcccc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gagtagtcgcaaaatgagatggttattgctgttacctgtactaatcgctacaacttcccc 72
Query: 548 aataagtgctagtataagaagctgggaagaagcggttcaagatgtaaaaggaaaaaaata 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aataagtgctagtataagaagctgggaagaagcggttcaagatgtaaaaggaaaaaaata 132
Query: 608 ttctccaaagtggcctagccttgatagtcgacctttgccagaatggtttgatcgtgctaa 667
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 133 ttctccaaagtggcctagccttgatagtcgacctttaccagaatggtttgatcgtgctaa 192
Query: 668 aatcggcatcttccttcactggggattgtactcagtgccgggctttgggtcagaatggtt 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aatcggcatcttccttcactggggattgtactcagtgccgggctttgggtcagaatggtt 252
Query: 728 ttggagtaattggaaaggtggagacaataaaacagtcaagttcatggaggcaaactatcc 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttggagtaattggaaaggtggagacaataaaacagtcaagttcatggaggcaaactatcc 312
Query: 788 acctggtttttcttatcaagaatttgcgccaatgttcaaggcagaattttttgatcctga 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acctggtttttcttatcaagaatttgcgccaatgttcaaggcagaattttttgatcctga 372
Query: 848 aaaatgggcatctttattccagaaagcgggagctaaatatgtaatactgactagtaagca 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaaatgggcatctttattccagaaagcgggagctaaatatgtaatactgactagtaagca 432
Query: 908 tcacgaaggctatactttattcccatcaaagagatcattcagctggaatgcaaaagaagt 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcacgaaggctatactttattcccatcaaagagatcattcagctggaatgcaaaagaagt 492
Query: 968 aggtccaaaaagagatctagtcaaagatgtagcaaatgctgtgaggaataagaacatgaa 1027
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 493 cggtccaaaaagagatctagtcaaagatgtagcgaatgctgtgaggaataagaacatgaa 552
Query: 1028 gtttggcgtgtaccactccctgtatgaatggttcaatcccatatacattgaagacaaaaa 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtttggcgtgtaccactccctgtatgaatggttcaatcccatatacattgaagacaaaaa 612
Query: 1088 gaatttatttacaacacggaattatgtcaatgacaagctgtggccggatttgaaacaact 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gaatttatttacaacacggaattatgtcaatgacaagctgtggccggatttgaaacaact 672
Query: 1148 tgtacatgattaccacccgtctgttatatggtctgacggggactgggaggcgtttgacgt 1207
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 673 tgtacatgattaccacccgtctgttatatggtctgatggggactgggaggcgtttgacgt 732
Query: 1208 ttattggaactccactgccttcctcgcatggctttacaacgacagt 1253
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ttattggaactccactgccttcctcgcatggctttacaacgacagt 778
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 287,315
Number of extensions: 6154
Number of successful extensions: 6154
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6154
Number of HSP's successfully gapped: 1
Length of query: 1843
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1826
Effective length of database: 8,119,229
Effective search space: 14825712154
Effective search space used: 14825712154
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)