BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17238 (UTR included)
(1798 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1894_C1 1403 0.0
>BF14_1894_C1
Length = 728
Score = 1403 bits (708), Expect = 0.0
Identities = 723/728 (99%)
Strand = Plus / Plus
Query: 431 aatcctctgtttcttatatatttattcatttacttcaatttacttaaaattttggaacaa 490
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 aatcctctgtttcttatatatttattcatttccttcaatttacttaaaattttggaacaa 60
Query: 491 aatcaataaaatgaatgacaacgaaaaagaggaagctgcaaatttgaaagacgagtttga 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatcaataaaatgaatgacaacgaaaaagaggaagctgcaaatttgaaagacgagtttga 120
Query: 551 atgggttcttcgtgaggaagttcacgctatattacatcaactacactcagttctagtgga 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgggttcttcgtgaggaagttcacgctatattacatcaactacactcagttctagtgga 180
Query: 611 atgtgcacatcgttttccagtcccactatatgggaatgaaggacaaaaacaagacaaatt 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtgcacatcgttttccagtcccactatatgggaatgaaggacaaaaacaagacaaatt 240
Query: 671 tatattaacatctcaaccagaacaactgaagtgtgttgtcacccttacaggagatagtat 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatattaacatctcaaccagaacaactgaagtgtgttgtcacccttacaggagatagtat 300
Query: 731 cacgcatgcagatataagttttaaagtattaaggcagatgcacacaatatgcaagacctc 790
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 cacacatgcagatataagttttaaagtattaaggcaaatgcacacaatatgcaagacctc 360
Query: 791 aattaaccaggatgggccttggaaactgcaacagatacaggatgctgctaatcatttaca 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aattaaccaggatgggccttggaaactgcaacagatacaggatgctgctaatcatttaca 420
Query: 851 acaagccattggctatatagataatgttgataaacattatgtattcaggtcatctgaaga 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaagccattggctatatagataatgttgataaacattatgtattcaggtcatctgaaga 480
Query: 911 agtgcttcatataatacagtgcttgctaggatccttacaaagagctagaacagctcttgt 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtgcttcatataatacagtgcttgctaggatccttacaaagagctagaacagctcttgt 540
Query: 971 gttacctaagaaaaaggctatcgatgagttaatgaagagtagaaatatgaaagcattatc 1030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gttacctaagaaaaaggctatcgatgagttaatgaagagtagaaatatgaaagcattatc 600
Query: 1031 tccaaatttgccagaagatcttgcaatatctttctacatacagtcccataaattgatatt 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tccaaatttgccagaagatcttgcaatatctttctacatacagtcccataaattgatatt 660
Query: 1091 tgtggcgtatcagcttagtttggttcatggaagtatgcgcattgactcatgtcaagccga 1150
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 661 tgttgcgtatcagcttagtttggttcatggaagtatgcgcattgactcgtgtcaagccga 720
Query: 1151 ctgtgccg 1158
||||||||
Sbjct: 721 ctgtgccg 728
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 329,175
Number of extensions: 9000
Number of successful extensions: 9000
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9000
Number of HSP's successfully gapped: 1
Length of query: 1798
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1781
Effective length of database: 8,119,229
Effective search space: 14460346849
Effective search space used: 14460346849
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)