BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17239 (UTR included)
(3916 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A1D04 1405 0.0
>BF01015A1D04
Length = 724
Score = 1405 bits (709), Expect = 0.0
Identities = 715/717 (99%)
Strand = Plus / Plus
Query: 437 tcttgtagttttcttttaatttatttgtacaaattgcagtgataaataattaaaacgata 496
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 8 tcttgtagttttcttttaatttatttgtacaaattgcagtgatcaataattaaaacgata 67
Query: 497 cacaatgtttgtccgtgtgtcaggatggtttggcttaatctctgtcataactatagcctt 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 cacaatgtttgtccgtgtgtcaggatggtttggcttaatctctgtcataactatagcctt 127
Query: 557 attcggtttcagattttatctaactttattaacattttttgtttcttttatagtgggggt 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 attcggtttcagattttatctaactttattaacattttttgtttcttttatagtgggggt 187
Query: 617 cttgactatcttatatttgaactacgatagcaagaaaatattcccattagatattgatta 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cttgactatcttatatttgaactacgatagcaagaaaatattcccattagatattgatta 247
Query: 677 tttggatgatcccctgcaacaatcaaatttctctgttcaatcagctaaaattttagaatt 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tttggatgatcccctgcaacaatcaaatttctctgttcaatcagctaaaattttagaatt 307
Query: 737 atttaaatctaaaaaatcactgcctaaatttgacagtagaataactggtagtgagacagt 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atttaaatctaaaaaatcactgcctaaatttgacagtagaataactggtagtgagacagt 367
Query: 797 ggattcattcctgaatgaaattgtttcaataattatcaatgactatgtcacaacttggta 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ggattcattcctgaatgaaattgtttcaataattatcaatgactatgtcacaacttggta 427
Query: 857 cgaacttataactgatgatcaagagcttactacatatgcaataaagaaattagttgttgc 916
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 428 cgaacttataactgatgatcaagagcttactacatatgcgataaagaaattagttgttgc 487
Query: 917 agcaggcgcaaatgtatcaaacagggtaaaaactgtagactggatacatctgttagcaac 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 agcaggcgcaaatgtatcaaacagggtaaaaactgtagactggatacatctgttagcaac 547
Query: 977 taggttcccggaagaattaacgttgcacttaaagttatttaaacagtctagggtaaggtt 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 taggttcccggaagaattaacgttgcacttaaagttatttaaacagtctagggtaaggtt 607
Query: 1037 aaaacggatgcagttgctgagtgccaaagaaatgaatggcaattcaaagccagttcctaa 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aaaacggatgcagttgctgagtgccaaagaaatgaatggcaattcaaagccagttcctaa 667
Query: 1097 gaggccagaggaaaaacggactcataggagaaataagagcgaaaccgatttactttg 1153
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gaggccagaggaaaaacggactcataggagaaataagagcgaaaccgatttactttg 724
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 425,219
Number of extensions: 7641
Number of successful extensions: 7641
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7641
Number of HSP's successfully gapped: 1
Length of query: 3916
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3898
Effective length of database: 8,109,745
Effective search space: 31611786010
Effective search space used: 31611786010
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)