BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17243 (UTR included)
(4111 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1A03 1411 0.0
BF01030B1C04 1231 0.0
>BF01037B1A03
Length = 752
Score = 1411 bits (712), Expect = 0.0
Identities = 743/752 (98%), Gaps = 1/752 (0%)
Strand = Plus / Plus
Query: 2134 tacagggcaaagctgatcctataaattccgc-cttccatcttacatacaacatggtcctg 2192
||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tacaggggaaagctgatcctataaattccgctcttccatcttacatacaacatggtcctt 60
Query: 2193 aatttattaagagttgaagagataaacccggagtacatgttggagaggagtttttatcag 2252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatttattaagagttgaagagataaacccggagtacatgttggagaggagtttttatcag 120
Query: 2253 ttccaaaaccaagctgttatcccagacctcatcgacaaggtgaaagctaagcaaaaggaa 2312
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 121 ttccaaaaccaagctgttatcccagacctcattgacaaggtgaaagctaagcaaaaggaa 180
Query: 2313 tatagcgcgttgtcaatagaggaggagcactctatagcttcatactgtaatataaggtca 2372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatagcgcgttgtcaatagaggaggagcactctatagcttcatactgtaatataaggtca 240
Query: 2373 cagttggagctgctggggtcacagttcaggtcgttcatcacgaagccggagtatatcaag 2432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagttggagctgctggggtcacagttcaggtcgttcatcacgaagccggagtatatcaag 300
Query: 2433 ccgttcctccagcccggtagacttgttaaggtgaaaacggaaaaatacgagtacgattgg 2492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccgttcctccagcccggtagacttgttaaggtgaaaacggaaaaatacgagtacgattgg 360
Query: 2493 ggcattatagtgaactttaaacacaaaaccggcaaaagtaagaaagacgagaaccccctg 2552
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 ggcattatagtgaactttaaacacaaaaccggcaagagtaagaaagacgagaaccccctg 420
Query: 2553 accgcggacaccgtcatagtggtggacgtgttgctgcatgttaagaaatcaaaagccgac 2612
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accgcggagaccgtcatagtggtggacgtgttgctgcatgttaagaaatcaaaagccgac 480
Query: 2613 gaggccgacacgaacgtgccttgtcctcctggagagaccggcgacgtagaggtggtgccg 2672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaggccgacacgaacgtgccttgtcctcctggagagaccggcgacgtagaggtggtgccg 540
Query: 2673 atcctacacacgttaatatatcagataagttcgctgcgggtgtactatcccaaagacctg 2732
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 541 atcctacacacgttaatatatcagataagttcgctgcgggtatactatcccaaagatctg 600
Query: 2733 cgaccgcccgacaacaggaagtcggtgctgaaaactataggggaggtcaagaagcggttc 2792
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 601 cgaccgcccgacaacaggaagtcggtgctgaaaactataggggaggtcaagaaacggttc 660
Query: 2793 ccggaaggaccgccgctactgaatcccatcaaggacatgaaaattgaggactctgtgttc 2852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccggaaggaccgccgctactgaatcccatcaaggacatgaaaattgaggactctgtgttc 720
Query: 2853 aaggaatgcgtcgagagaatcaagttgttaga 2884
||||||||||||||||||||||||||||||||
Sbjct: 721 aaggaatgcgtcgagagaatcaagttgttaga 752
>BF01030B1C04
Length = 657
Score = 1231 bits (621), Expect = 0.0
Identities = 648/657 (98%)
Strand = Plus / Plus
Query: 1446 agcggagacgggattcatcttgttgtggatgaaaagggtcaattcaaagaggacaacttc 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcggagacgggattcatcttgttgtggatgaaaagggtcaattcaaagaggacaacttc 60
Query: 1506 aatacagctatgacggtgttgagtaacgcgggcggggcgtcggcggggggtgagcgcggc 1565
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||
Sbjct: 61 aatacagctatgacggtgttaagtaacgcgggcggggcgtcggcagggggtgagcggggc 120
Query: 1566 cggagggggggactcaagggggggagcagtagtatctttaatatagtcaaaatgatcatg 1625
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 121 cggagggggggactcaagggggggagcagtagtatctttaatatagttaaaatgatcatg 180
Query: 1626 gagagaaacttcgcaccggtgattatattcagtttcagtaagaaagactgcgagctgtat 1685
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagagaaacttcgcaccggtcattatattcagtttcagtaagaaagactgcgagctgtat 240
Query: 1686 gctatgcagatggctaaattggattttaatacaattgaagagaaaaaacttgtagacgag 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctatgcagatggctaaattggattttaatacaattgaagagaaaaaacttgtagacgag 300
Query: 1746 gttttcaacaacgcgatggacgttctatctgaagacgatcgtaagttaccgcaggttgaa 1805
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 gttttcaacaacgcgatggacgttctatctgaagacgatcgtaagttgccgcaggttgaa 360
Query: 1806 aacgtgatacccttgttgaggagaggcatcggtatacatcacggaggactgctgcccata 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aacgtgatacccttgttgaggagaggcatcggtatacatcacggaggactgctgcccata 420
Query: 1866 ctgaaagaaaccatagaaatattgttcggcctggggcttatcaaggcgctgttcgccacc 1925
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctgaaggaaaccatagaaatattgttcggcctggggcttatcaaggcgctgttcgccacc 480
Query: 1926 gagaccttcgccatggggctcaacatgcccgctaggactgttgtgttcacaaattgccag 1985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagaccttcgccatggggctcaacatgcccgctaggactgttgtgttcacaaattgccag 540
Query: 1986 aagtttgacggcaaggacttcagatttataacttccggtgaatacatccagatgtcaggt 2045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagtttgacggcaaggacttcagatttataacttccggtgaatacatccagatgtcaggt 600
Query: 2046 agagctggtcgtcgagggttggacgataaaggtatcgtcatactgatgatcgatcag 2102
|||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 601 agagctggtcgtcgagggctggacgataaaggtatcgtcatactaatgatcgatcag 657
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 431,469
Number of extensions: 8473
Number of successful extensions: 8473
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8472
Number of HSP's successfully gapped: 2
Length of query: 4111
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4093
Effective length of database: 8,109,745
Effective search space: 33193186285
Effective search space used: 33193186285
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)