BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17256 (UTR included)
(1858 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1973_C1 1522 0.0
>BF14_1973_C1
Length = 869
Score = 1522 bits (768), Expect = 0.0
Identities = 771/772 (99%)
Strand = Plus / Plus
Query: 428 aatcgaagctaataaggtggtgtgttatgctcatcccgatgccccgcttattgaggatta 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 aatcgaagctaataaggtggtgtgttatgctcatcccgatgccccgcttattgaggatta 157
Query: 488 tcgagcgggtgacatgatatgttcagaatgcggcctcgttgttggcgacagagttataga 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tcgagcgggtgacatgatatgttcagaatgcggcctcgttgttggcgacagagttataga 217
Query: 548 tgtaggttcagaatggcgtaccttcagcaatgagaaatctggagtcgatccatctcgtgt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tgtaggttcagaatggcgtaccttcagcaatgagaaatctggagtcgatccatctcgtgt 277
Query: 608 gggaggtccggaaaatcctttgctatcaggaggggatctctccactatcattggtcccgg 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gggaggtccggaaaatcctttgctatcaggaggggatctctccactatcattggtcccgg 337
Query: 668 aagaggcgatgcttcctttgacagttttggggtatccaaatatcaaaaccgaagaaatat 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aagaggcgatgcttcctttgacagttttggggtatccaaatatcaaaaccgaagaaatat 397
Query: 728 aagcagcacagacagagcgcttataaatgcgtttagagaaataaacactatggctgatag 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aagcagcacagacagagcgcttataaatgcgtttagagaaataaacactatggctgatag 457
Query: 788 aattaatctgcctaaaactatagtggacagagccaataatttgtttaaacaggtacacga 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aattaatctgcctaaaactatagtggacagagccaataatttgtttaaacaggtacacga 517
Query: 848 tggaaaaaatttaaaaggcagagcaaacgatgcaatagcctcagcatgtctatatatagc 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tggaaaaaatttaaaaggcagagcaaacgatgcaatagcctcagcatgtctatatatagc 577
Query: 908 ttgccggcaggaaggagtgccgagaacattcaaagaaatctgtgcggttagtaaaattag 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ttgccggcaggaaggagtgccgagaacattcaaagaaatctgtgcggttagtaaaattag 637
Query: 968 taagaaagaaattggaagatgtttcaaactgatccttaaggctttggaaacgtcagtgga 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 taagaaagaaattggaagatgtttcaaactgatccttaaggctttggaaacgtcagtgga 697
Query: 1028 cttgataacaacagcagatttcatgtctcggttttgtgccaatctgggtttaccaaactc 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 cttgataacaacagcagatttcatgtctcggttttgtgccaatctgggtttaccaaactc 757
Query: 1088 agtgcaacgagctgcaacacatattgcaaggaaagccggggaattggacattgtgtctgg 1147
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 758 agtgcaacgagctgcaacacatattgcaaggaaagctggggaattggacattgtgtctgg 817
Query: 1148 aagaagtcccatatctgtggcagccgctgccatatatatggcttcacaggcg 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 aagaagtcccatatctgtggcagccgctgccatatatatggcttcacaggcg 869
Score = 192 bits (97), Expect = 1e-48
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 234 tctgtttttataataaatttttaatttttactgtctcgtttcggagttattaaacttttg 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctgtttttataataaatttttaatttttactgtctcgtttcggagttattaaacttttg 60
Query: 294 ttaaaccgaataatattaaatatctaaattgttatat 330
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaaaccgaataatattaaatatctaaattgttatat 97
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,015
Number of extensions: 5584
Number of successful extensions: 5584
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5584
Number of HSP's successfully gapped: 2
Length of query: 1858
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1841
Effective length of database: 8,119,229
Effective search space: 14947500589
Effective search space used: 14947500589
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)