BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17261 (UTR included)
(5155 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 1883 0.0
BF01049A2D11 202 4e-51
BF14_729_C1 194 1e-48
>BF14_729_C3
Length = 2041
Score = 1883 bits (950), Expect = 0.0
Identities = 989/1002 (98%)
Strand = Plus / Plus
Query: 1337 ggtttcccccgttgtcgctgacatattcatggaggacttcgaggtgcgagccctttgctc 1396
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggtttcccccgttgtcgctgaaatattcatggaggacttcgaggtgcgagccctttgctc 547
Query: 1397 tcctcctataagacctttaatttataaacggtatgtagatgacaccttcacaatattaaa 1456
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 548 tcctcctataagacctttaatttttaaacggtatgtagatgacacctttacaatattaaa 607
Query: 1457 taaaaataaaacatctgcttttctgaaccatctcaattctatcaatagtaagattcagtg 1516
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 608 taaaaataaaacatctgcttttctgaaccatctcaattctatcaataataagattcagtt 667
Query: 1517 tactatagaattggaggcaaataattctttagctttccttgatatacttgttgttaggaa 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tactatagaattggaggcaaataattctttagctttccttgatatacttgttgttaggaa 727
Query: 1577 tcctgacaatactttgggacatactgtttataggaaacccacacatacggacaggtacct 1636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tcctgacaatactttgggacatactgtttataggaaacccacacatacggacaggtacct 787
Query: 1637 caatggttactcacaccaccaccctatccagttagctaccgttggcaaatctttgttaca 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 caatggttactcacaccaccaccctatccagttagctaccgttggcaaatctttgttaca 847
Query: 1697 gagagcccaacatctttgtgatgctgaccacctagaggccgagctgcagcatgtaaaaca 1756
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gagagcccaacacctttgtgatgctgaccacctagaggccgagctgcagcatgtaaaaca 907
Query: 1757 tgctctcactatcaacaacctgcccgtgcctcgccagcatcgcaagaagcacctgaagcc 1816
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 908 tgctctcactatcaacaacctgcccgtgcctcgccagcatcgcaagaaccacctgaagcc 967
Query: 1817 acccacagttgaacgacaacctgcgatactaccatatgtgaagggagttactgacagaat 1876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 acccacagttgaacgacaacctgcgatactaccatatgtgaagggagttactgacagaat 1027
Query: 1877 aggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataagaaagtgag 1936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 aggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataagaaagtgag 1087
Query: 1937 ccaattcttgagaccaatcaagagtaacattcctttacaacaagcgggtgtatacaaact 1996
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 ccaattcttgagaccaatcaaaagtaacattcctttacaacaagcgggtgtatacaaact 1147
Query: 1997 cgactgtgactgtgtcttgtcatacattggacagacgaagaggagcatcggtacaagggt 2056
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1148 cgactgtgactgtggcttgtcatacattggacagacgaagaggagcatcggtacaagagt 1207
Query: 2057 taaggaacacatctcagatatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaaca 2116
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 taaggaacacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaaca 1267
Query: 2117 cacaatggacaaaccaggccactacattcgttttgataaacctcaaatcctcgctcggga 2176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 cacaatggacaaaccaggccactacattcgttttgataaacctcaaatcctcgctcggga 1327
Query: 2177 agacaagtatataccgagattaattcgcgaggctattgaaattaaaaaacatcccaattt 2236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 agacaagtatataccgagattaattcgcgaggctattgaaattaaaaaacatcccaattt 1387
Query: 2237 caatagagaagatggctggaatctttcaaacacctgggaccccgttcttaaaaatataaa 2296
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1388 caatagagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaa 1447
Query: 2297 atcccatgtccgtaaccacaccgcaggacctcaagacaccgt 2338
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1448 atcccatgtccgaaaccacaccgcaggacctcaagacaccgt 1489
Score = 87.7 bits (44), Expect = 2e-16
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1401 cctataagacctttaatttataaacggtatgtagatgacaccttcacaatat 1452
||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 489 cctataagacctttaatatataaacggtatgtagttgacaccttcacaatat 438
>BF01049A2D11
Length = 776
Score = 202 bits (102), Expect = 4e-51
Identities = 148/162 (91%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 2013 ttgtcatacattggacagacgaagaggagcatcggtacaagggttaaggaacacatctca 2072
|||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 2073 gatatcaa-aaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaacc 2131
|| |||| ||| ||| | | |||||||||||||| |||||||||||||||||||||||
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 2132 aggccactacattcgttttgataaacctcaaatcctcgctcg 2173
||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcg 775
>BF14_729_C1
Length = 981
Score = 194 bits (98), Expect = 1e-48
Identities = 132/142 (92%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 1858 agggagttactgacagaataggcaacatcttgaagaaggtttccattaaaactatttaca 1917
|||||||||||||||||||||||||||| ||||||||| ||||||| || |||||| |||
Sbjct: 142 agggagttactgacagaataggcaacattttgaagaagctttccatcaagactattcaca 83
Query: 1918 aaccacataagaaagtgagccaattcttgagaccaatcaagagtaacattcctttacaac 1977
|||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||
Sbjct: 82 aaccacataagaaagtgagccaattcttgagacctatcaagagtaacatt-cattggaac 24
Query: 1978 aagcgggtgtatacaaactcga 1999
||||||||||||||||||||||
Sbjct: 23 aagcgggtgtatacaaactcga 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 513,471
Number of extensions: 9551
Number of successful extensions: 9551
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 9550
Number of HSP's successfully gapped: 5
Length of query: 5155
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5137
Effective length of database: 8,109,745
Effective search space: 41659760065
Effective search space used: 41659760065
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)