BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17263 (UTR included)
(1341 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032A2C04 1386 0.0
>BF01032A2C04
Length = 773
Score = 1386 bits (699), Expect = 0.0
Identities = 754/773 (97%)
Strand = Plus / Plus
Query: 455 aagagacccaaatacatgttgctgtgtacactgtacatacttattggtttggcgctgacg 514
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 aagagacccaaatatatgttgctgtgtacactgtacatacttattgggttggcgctgacg 60
Query: 515 tctactattatcgaacttgtgaggcgacagtatgctaggtcttggcaacaactgcgagct 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctactattatcgaacttgtgaggcgacagtatgctaggtcttggcaacaactgcgagct 120
Query: 575 ctctccggaccgttcgcagacacattgagaagactcggcgacgccggtaggggtgtcgac 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctctccggaccgttcgcagacacattgagaagactcggcgacgccggtaggggtgtcgac 180
Query: 635 gtgtccgccttacataacgacctgagaaaagttcttaccattgtgacgatgccgaaactc 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgtccgccttacataacgacctgagaaaagttcttaccattgtgacgatgccgaaactc 240
Query: 695 ggtagcgctagggactcgctcggcgagaagaggcagttggaatttgaagcagccgtcgag 754
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 241 ggtagcgcgagggactcgctcggcgagaagaggcaattggaatttgaagcagccgtcgag 300
Query: 755 gctgtgatcagggagataaccagcccagtgtcgagtcagccgaagcctccagttgtccag 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctgtgatcagggagataaccagcccagtgtcgagtcagccgaagcctccagttgtccag 360
Query: 815 attgtgatatatgaatcgtcagtttaacttggactgaatgacgctttattttatggacag 874
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attgtgatatatgaatcatcagtttaacttggactgaatgacgctttattttatggacag 420
Query: 875 ttttaatgccccaactaaaacgatgcttaagcctatgatttgtgttctaaggttaaacac 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttttaatgccccaactaaaacgatgcttaagcctatgatttgtgttctaaggttaaacac 480
Query: 935 gttcttacttataagcactcgctacaagctcagctacatcttgatataacaatcagctaa 994
||||| | ||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 481 gttctcatttataagcactcgctacaagctcggctacatcttcatataacaatcagctaa 540
Query: 995 gactcttacacccagaaactatgcatcaatatactcttagttaatttttactgttctcta 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 541 gactcttacacccagaaactatgcatcaatatactcttagttaatttttactgttttcta 600
Query: 1055 tatatagtcggataaaaacttttgttgttactgtcaccattaaactcaatgatgcaatta 1114
||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||
Sbjct: 601 tatatagtcggataaaaacatttatttttactgtcaccattaaactcaatgatgcatttg 660
Query: 1115 taaatactcggcttccaatatcaaaaacgtttcccaagctaatatattgctattgcaata 1174
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 661 taaatactcggcttccaatatcaaaaacgtttcctaagctaatatattgcgattgcaata 720
Query: 1175 ataatagatttttgcactcaagatttatctctcgaacactaataatatatcgc 1227
||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 721 ataatagatttttgcactcaaganntatctctcgaacactaataatatatcgc 773
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 135,218
Number of extensions: 2054
Number of successful extensions: 2054
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2054
Number of HSP's successfully gapped: 1
Length of query: 1341
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1324
Effective length of database: 8,119,229
Effective search space: 10749859196
Effective search space used: 10749859196
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)