BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17281 (UTR included)
(1639 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2656_C1 1560 0.0
BF01038B2F08 100 1e-20
>BF14_2656_C1
Length = 828
Score = 1560 bits (787), Expect = 0.0
Identities = 796/799 (99%)
Strand = Plus / Plus
Query: 499 agatggtgtgcaagttaaaagagttagcggtgcagctgttcgacgcgggggcgctgcgca 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30 agatggtgtgcaagttaaaagagttagcggtgcagctgttcgacgcgggggcgctgcgca 89
Query: 559 tcggagacatagaggccaagctggggcggaggacccccatatactttgacctcagggtcg 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 tcggagacatagaggccaagctggggcggaggacccccatatactttgacctcagggtcg 149
Query: 619 tcgtatctcatcctaagatcgtgaaggcgatctcacaacaactggaagtcctgtcgtccg 678
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 150 tcgtatctcatcctaagatcgtgaaggcgatctcccaacaactggaagtcctgtcgtccg 209
Query: 679 gagtgcatcacgagctggtgtgcggagtgccgtacgcggcgctgcccttcgccgccgtca 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gagtgcatcacgagctggtgtgcggagtgccgtacgcggcgctgcccttcgccgccgtca 269
Query: 739 tgtccgtcaacacggacacgcccatgatcatgaagaggaaggagactaaactgtacggca 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgtccgtcaacacggacacgcccatgatcatgaagaggaaggagactaaactgtacggca 329
Query: 799 ccaagaagatactagaaggagtgttccagaagaatcagacgtgtctcgtggtggaggacg 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ccaagaagatactagaaggagtgttccagaagaatcagacgtgtctcgtggtggaggacg 389
Query: 859 tggtgacgtccggcggcaccttactggagacggttaacacgctgcggagcgagggtctgg 918
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 390 tggtgacgtccggcggcaccttactggagacggttaacacgctgcggagcgagggtctag 449
Query: 919 tggtgacagacgctgtcgtggtactcgacagggagcaggggggcgtcggcgtgctggagg 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tggtgacagacgctgtcgtggtactcgacagggagcaggggggcgtcggcgtgctggagg 509
Query: 979 cgagcggcgtcagggtgcgttccatgttcaccataacggagctggtctccatgttgaggg 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cgagcggcgtcagggtgcgttccatgttcaccataacggagctggtctccatgttgaggg 569
Query: 1039 acgccggcagggttagcgaacaaacagtagacataatatcggaccacattaaggaatgtc 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 acgccggcagggttagcgaacaaacagtagacataatatcggaccacattaaggaatgtc 629
Query: 1099 agttcggagcgaaagacaactgtgatccagtcgatacataaacaatattaatgatttgga 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 agttcggagcgaaagacaactgtgatccagtcgatacataaacaatattaatgatttgga 689
Query: 1159 atttatatattagttatttatgttcgcaacactcgttactatttgtaagttgattcatgc 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 atttatatattagttatttatgttcgcaacactcgttactatttgtaagttgattcatgc 749
Query: 1219 gagattgtaactcattccttaatagtaaaaggacaaacgattaattgaagctgttccttt 1278
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 750 gagattgtaactcattccttaatagtaaaaggacaaacgattaattgaagctgtcccttt 809
Query: 1279 tttatattttatgtaaaat 1297
|||||||||||||||||||
Sbjct: 810 tttatattttatgtaaaat 828
>BF01038B2F08
Length = 786
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 309 atcagtcataaaaacaattctaaggattatagtatattataattagtatagcacggaggg 368
||||||| ||| ||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 663 atcagtcgtaagaacaattctaaggattatagtatgttataattagctcagcacggaggg 722
Query: 369 cgccacttgtaaca 382
||||||||||||||
Sbjct: 723 cgccacttgtaaca 736
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,389
Number of extensions: 9082
Number of successful extensions: 9082
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9082
Number of HSP's successfully gapped: 2
Length of query: 1639
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1622
Effective length of database: 8,119,229
Effective search space: 13169389438
Effective search space used: 13169389438
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)