BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17285 (UTR included)
(1468 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048A1E11 1057 0.0
BF01059B2D05 115 2e-25
>BF01048A1E11
Length = 760
Score = 1057 bits (533), Expect = 0.0
Identities = 533/533 (100%)
Strand = Plus / Minus
Query: 1 cggcggacggtagataggattgttgtttatcacatagcgctccctggtagacacgtctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cggcggacggtagataggattgttgtttatcacatagcgctccctggtagacacgtctgt 569
Query: 61 gaactcccaggggtgcgttacaaacgagtttatattgtagttggcacctggttccagtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gaactcccaggggtgcgttacaaacgagtttatattgtagttggcacctggttccagtcg 509
Query: 121 cacgtagtgtcgcttcgctccattgtagtctcgccaccagacatccacaggacgagaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 cacgtagtgtcgcttcgctccattgtagtctcgccaccagacatccacaggacgagaagt 449
Query: 181 cctgttgaaaaatcgcagaaaagctctagaggacgattcgatcgacctgaccaaaaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cctgttgaaaaatcgcagaaaagctctagaggacgattcgatcgacctgaccaaaaccct 389
Query: 241 ttctcccttttcatctatttcatatacaagtgaattttggttctccgtcatcatcatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttctcccttttcatctatttcatatacaagtgaattttggttctccgtcatcatcatcaa 329
Query: 301 cttgtataacaagtagagtagaattttgactgatttatgaacactcttagtaaataaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cttgtataacaagtagagtagaattttgactgatttatgaacactcttagtaaataaata 269
Query: 361 aatggcagggtgttccacaccctacgaatatcaatatatattttatgcacaggtattgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aatggcagggtgttccacaccctacgaatatcaatatatattttatgcacaggtattgtt 209
Query: 421 tttaaatcgtcccgccttttactacaacctgacagtcacatacatatgtcaatacacttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tttaaatcgtcccgccttttactacaacctgacagtcacatacatatgtcaatacacttc 149
Query: 481 cgtttagattttcgtacacaatggccgtttgcgttgctgttatcgggaaagac 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 cgtttagattttcgtacacaatggccgtttgcgttgctgttatcgggaaagac 96
>BF01059B2D05
Length = 465
Score = 115 bits (58), Expect = 2e-25
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 1396 tctccggttcagcgctgagcaatttttaataggaaagttgtttatctcgaccgggaaatc 1455
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 tctccggttcagcgctgagcaatttttaatannttagttgtttatctcgaccgggaaatc 60
Query: 1456 gcatcaatatgg 1467
||||||||||||
Sbjct: 61 gcatcaatatgg 72
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 184,601
Number of extensions: 3902
Number of successful extensions: 3902
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3901
Number of HSP's successfully gapped: 2
Length of query: 1468
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1451
Effective length of database: 8,119,229
Effective search space: 11781001279
Effective search space used: 11781001279
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)