BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN17308 (UTR included)
(1345 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B2B02 309 6e-84
BF14_30_C2 309 6e-84
BF01032A2E08 194 3e-49
>BF01014B2B02
Length = 669
Score = 309 bits (156), Expect = 6e-84
Identities = 159/160 (99%)
Strand = Plus / Plus
Query: 949 tgtaacgtagtatttaattaaaataggaaagcaaataaaacaatgagcggtttagatgac 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 tgtaacgtagtatttaattaaaataggaaagcaaataaaacaatgagcggtttagatgac 94
Query: 1009 atatcaaaattgtctattctctcaagctgattacatagactatagactaacatttttatt 1068
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atatcgaaattgtctattctctcaagctgattacatagactatagactaacatttttatt 154
Query: 1069 tggtttatggcttaggacagatgcctatagatactttaca 1108
||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tggtttatggcttaggacagatgcctatagatactttaca 194
>BF14_30_C2
Length = 922
Score = 309 bits (156), Expect = 6e-84
Identities = 159/160 (99%)
Strand = Plus / Minus
Query: 949 tgtaacgtagtatttaattaaaataggaaagcaaataaaacaatgagcggtttagatgac 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tgtaacgtagtatttaattaaaataggaaagcaaataaaacaatgagcggtttagatgac 674
Query: 1009 atatcaaaattgtctattctctcaagctgattacatagactatagactaacatttttatt 1068
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 673 atatcaaaattgtctattctgtcaagctgattacatagactatagactaacatttttatt 614
Query: 1069 tggtttatggcttaggacagatgcctatagatactttaca 1108
||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tggtttatggcttaggacagatgcctatagatactttaca 574
>BF01032A2E08
Length = 405
Score = 194 bits (98), Expect = 3e-49
Identities = 107/110 (97%)
Strand = Plus / Minus
Query: 999 tttagatgacatatcaaaattgtctattctctcaagctgattacatagactatagactaa 1058
||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 405 tttagatgacatatcaaaattgtgtattgtctcaagctgattgcatagactatagactaa 346
Query: 1059 catttttatttggtttatggcttaggacagatgcctatagatactttaca 1108
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 catttttatttggtttatggcttaggacagatgcctatagatactttaca 296
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 239,779
Number of extensions: 11316
Number of successful extensions: 11316
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 11316
Number of HSP's successfully gapped: 3
Length of query: 1345
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1328
Effective length of database: 8,119,229
Effective search space: 10782336112
Effective search space used: 10782336112
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)